ggKbase home page

scnpilot_solids1_trim150_scaffold_824_curated_5

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(1602..1871)

Top 3 Functional Annotations

Value Algorithm Source
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7J5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 89.0
  • Bit_score: 159
  • Evalue 1.50e-36
Transcriptional regulator HU subunit alpha {ECO:0000313|EMBL:KIC95229.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 89.0
  • Bit_score: 161
  • Evalue 7.10e-37
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 89.0
  • Bit_score: 159
  • Evalue 4.60e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 270
ATGAACAAAGCTGAACTTATCGCCAAGATGGCCGATGATGCGGGTGTTACAAAAACACAAGCCAATGCTGCTTTAGATTCTTTTACAACAGCAGTAACTAAAACTTTAAAAGGTGGTGGAAAAGTTACCTTAGTTGGTTTTGGTACTTTCTCAGTTAGCAAAAGAGCTGCACGTAACGGCCGTAACCCACAAACAGGCGCTGTTATTAAAATCAAAGCTAAGAAAGTAGCTAAATTTAAAGCAGGTAAAGAACTGTCATCGAAAATCTGA
PROTEIN sequence
Length: 90
MNKAELIAKMADDAGVTKTQANAALDSFTTAVTKTLKGGGKVTLVGFGTFSVSKRAARNGRNPQTGAVIKIKAKKVAKFKAGKELSSKI*