ggKbase home page

scnpilot_solids1_trim150_scaffold_768_curated_34

Organism: solids_Sphingobacteriales_4

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(29253..30734)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 493.0
  • Bit_score: 734
  • Evalue 7.90e-209
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 494.0
  • Bit_score: 748
  • Evalue 5.70e-213
RNA polymerase, sigma 54 subunit, RpoN/SigL; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 493.0
  • Bit_score: 734
  • Evalue 2.50e-209

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1482
ATGTCTTTAAGCCAACGCTTACAACAGAAATTATTACAAAAATTATCGCCGCAGCAGATACAGTTGATGAAATTGCTGCAGGTTCCTACTGCGCATCTCGAAGAAAGAATTAAAGAAGAATTGGAGGAAAACCCGGCCCTGGAAGCAGGTGAGGATGGCTATACAGAATCGAATGAAGATCTGCAGGACGATTTTGAAACTACGGATGATTTTGAGAATGATGGCAGCGAAAGCGACTATGAGAACATTGATATAAGTGAATACGTCAGCGACGGAGATGATGAACCAGGAGATTATAAATACCGCGACGAGAATTATGGAGACCCTGATGATAAAAAAGTAATGCCACATAAAGTAGAAACTACTTTTTATGATGCGCTAAAGTCCCAGTTATTGATGCTTCACCTGAATGAAAATGAACGCAAAATTGCTGAACAGATCATAGGAAGTATTGATGATGATGGTTACCTGCGCCGTGAAGTTACCTCCATTTCCGATGATCTTGCTTTCCGTCAAAATATTATTGCAACTGAGAAGGAAATTGAAAAGTTGATCAGCCTGATTCAACAGTTTGATCCGCCGGGAGTAGGAGCGCGAAACTTACAGGAATGTTTGTTATTGCAATTACAAAGGAAAGAGAAATCGGGGCATCTGGTAAGCATCGCTATTGAAATAATAGAAAAATATTTTGATGAATTTACAAAAAAACATTACGAAAAAATTCAAAAAAGCTTAAACCTGGATGATGAACAGATCAAGGAAGTAATTAACCAGATCATTAAATTAAACCCGAAGCCTGGTGGTGAAGTTGGCGAAACCAATAAGCTCCAGAGCTATGTGATCCCTGATTTTTTTGTGTTGAATAACAATGGCAAACTTGAAGTTACGCTCAATTCAAAAAATGCTCCTGACCTGCGCATCAGCGAGGGATACAGGGATATGCTGAAAGATTACGACCGCGGTAACAAAAAAGACAAGCGCCAAAAAGAGGCAGTGCTTTTTATTAAACAAAAAATAGATTCTGCCAAATGGTTTATAGATGCCATTAAACAGAGGCAGCATACTCTGTTAAGCACTATGCAAACCATCGTGGACTATCAAAAGCAATTTTTCTTAACAGGGGAAGACATTGATTTGCGGCCTATGATATTAAAAGATATTGCCGAAAAAACGATGCTTGATATTTCGACAGTGAGCAGGGTAGCCAATAGCAAATTCGTTCAGACTGAATTTGGAACCTACCGCCTTAAATTTTTCTTTAGCGAAAGCCTTGTAACCGATAGCGGCGAAGAAGTAAGCACACGCGAAGTGAAAAAAATATTAAGCGATCTGATAGAAGAAGAAAGTAAGCAAAAGCCATTGAGCGATGAAAAGCTTACCGAATTATTACAGGAAAAAGGATACAATATTGCCCGGCGTACGGTAGCCAAATACAGGGAGCAACTTAATATTCCTGTAGCCCGCCTAAGAAAAGAACTTTAA
PROTEIN sequence
Length: 494
MSLSQRLQQKLLQKLSPQQIQLMKLLQVPTAHLEERIKEELEENPALEAGEDGYTESNEDLQDDFETTDDFENDGSESDYENIDISEYVSDGDDEPGDYKYRDENYGDPDDKKVMPHKVETTFYDALKSQLLMLHLNENERKIAEQIIGSIDDDGYLRREVTSISDDLAFRQNIIATEKEIEKLISLIQQFDPPGVGARNLQECLLLQLQRKEKSGHLVSIAIEIIEKYFDEFTKKHYEKIQKSLNLDDEQIKEVINQIIKLNPKPGGEVGETNKLQSYVIPDFFVLNNNGKLEVTLNSKNAPDLRISEGYRDMLKDYDRGNKKDKRQKEAVLFIKQKIDSAKWFIDAIKQRQHTLLSTMQTIVDYQKQFFLTGEDIDLRPMILKDIAEKTMLDISTVSRVANSKFVQTEFGTYRLKFFFSESLVTDSGEEVSTREVKKILSDLIEEESKQKPLSDEKLTELLQEKGYNIARRTVAKYREQLNIPVARLRKEL*