ggKbase home page

scnpilot_solids1_trim150_scaffold_9609_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_9609_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..526
DNA (525bp) protein (175aa)
Threonine dehydratase {ECO:0000313|EMBL:ENY83202.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ENY83202.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6S2_9SPHN
scnpilot_solids1_trim150_scaffold_9609_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

647..1102
DNA (456bp) protein (152aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WIC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83201.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_9609_curated_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1099..1611
DNA (513bp) protein (171aa)
GCN5 family acetyltransferase n=1 Tax=Sphingomonas wittichii RepID=UPI00030C11AA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ69125.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids1_trim150_scaffold_9609_curated_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1622..1951)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HZI9_9SPHN
Small multidrug resistance protein {ECO:0000313|EMBL:KGB57000.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
small multidrug resistance protein; K03297 small multidrug resistance protein, SMR family
scnpilot_solids1_trim150_scaffold_9609_curated_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2052..2534
DNA (483bp) protein (161aa)
Putative acetyltransferase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HKW9_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KGB58024.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
putative acetyltransferase
scnpilot_solids1_trim150_scaffold_9609_curated_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2538..2960)
DNA (423bp) protein (141aa)
type 12 methyltransferase; K15256 tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
Methyltransferase type 12 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6R1_9SPHN
Methyltransferase type 12 {ECO:0000313|EMBL:AJA10175.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
Displaying 6 items

View Taxonomy