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scnpilot_solids1_trim150_scaffold_978_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_978_curated_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1084)
DNA (1083bp) protein (361aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KH98_STEMA
scnpilot_solids1_trim150_scaffold_978_curated_2
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1255..1812
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003806AFE
Uncharacterized protein {ECO:0000313|EMBL:AHY58420.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_978_curated_3
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2120..3127
DNA (1008bp) protein (336aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:ELQ07213.1}; EC=2.1.3.9 {ECO:0000313|EMBL:ELQ07213.1};; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
argF; ornithine carbamoyltransferase, chain f protein (EC:2.1.3.3); K09065 N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
N-acetylornithine carbamoyltransferase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GNK5_XANCT
scnpilot_solids1_trim150_scaffold_978_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3199..4407
DNA (1209bp) protein (403aa)
argG; argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5]
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Argininosuccinate synthase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQR1_STEMA
scnpilot_solids1_trim150_scaffold_978_curated_5
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4662..5759
DNA (1098bp) protein (366aa)
peptidase dimerization domain-containing protein; K01438 acetylornithine deacetylase [EC:3.5.1.16]
acetylornithine deacetylase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003018127
Peptidase dimerization domain protein {ECO:0000313|EMBL:ADV27076.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_978_curated_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5799..7115
DNA (1317bp) protein (439aa)
Acetylglutamate kinase {ECO:0000313|EMBL:EED40561.1}; EC=2.7.2.8 {ECO:0000313|EMBL:EED40561.1};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
acetylglutamate kinase (EC:2.3.1.1 2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Acetylglutamate kinase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9B5_9GAMM
scnpilot_solids1_trim150_scaffold_978_curated_7
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7120..7731
DNA (612bp) protein (204aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C2L1_9XANT
Acetyltransferase {ECO:0000313|EMBL:KGM54850.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
amino-acid acetyltransferase
scnpilot_solids1_trim150_scaffold_978_curated_8
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7728..8681
DNA (954bp) protein (318aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UUH8_PSEUP
scnpilot_solids1_trim150_scaffold_978_curated_9
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8713..10005
DNA (1293bp) protein (431aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1]
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
argininosuccinate lyase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A36F2B
scnpilot_solids1_trim150_scaffold_978_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10125..10382
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A4D9E8
hypothetical protein
YCII-related {ECO:0000313|EMBL:ACF52422.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_978_curated_11
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10387..11538
DNA (1152bp) protein (384aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
proB; gamma-glutamyl kinase (EC:2.7.2.11); K00931 glutamate 5-kinase [EC:2.7.2.11]
glutamate 5-kinase n=1 Tax=Xanthomonas sacchari RepID=UPI00026315D3
scnpilot_solids1_trim150_scaffold_978_curated_12
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11594..12841
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomon
proA; gamma-glutamyl phosphate reductase (gpr) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) (gsa dehydrogenase) protein (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
gamma-glutamyl phosphate reductase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000374A735
scnpilot_solids1_trim150_scaffold_978_curated_13
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12894..14108)
DNA (1215bp) protein (405aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E1D743
MFS transporter {ECO:0000313|EMBL:AHY58435.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
major facilitator superfamily protein; K03449 MFS transporter, CP family, cyanate transporter
scnpilot_solids1_trim150_scaffold_978_curated_14
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14632..14742)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SSV4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:CCP38431.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;"
cyd operon protein YbgT
scnpilot_solids1_trim150_scaffold_978_curated_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14768..15919)
DNA (1152bp) protein (384aa)
cydB; Cytochrome d ubiquinol oxidase subunit II (EC:1.10.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:CCH13386.1}; EC=1.10.3.- {ECO:0000313|EMBL:CCH13386.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
Cytochrome d ubiquinol oxidase subunit II n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KQP6_STEMA
scnpilot_solids1_trim150_scaffold_978_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15935..17503)
DNA (1569bp) protein (523aa)
Cytochrome d ubiquinol oxidase, subunit I {ECO:0000313|EMBL:CCP12437.1}; EC=1.10.3.- {ECO:0000313|EMBL:CCP12437.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
cydA; putative cytochrome D ubiquinol oxidase subunit I (EC:1.10.3.-); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome D ubiquinol oxidase subunit I n=2 Tax=Stenotrophomonas RepID=B8L9C9_9GAMM
scnpilot_solids1_trim150_scaffold_978_curated_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17700..18116
DNA (417bp) protein (139aa)
cysteine ABC transporter permease/ATP-binding protein CydD (EC:3.6.3.44); K16013 ATP-binding cassette, subfamily C, bacterial CydD
ABC transporter ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI0002630A0E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHY58439.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Displaying 17 items

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