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scnpilot_solids1_trim150_scaffold_174_curated

Search features with annotation key words

Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_174_curated_31
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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36197..37174
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EC6996
Uncharacterized protein {ECO:0000313|EMBL:AHY57987.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_174_curated_32
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37209..37850)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQI9_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC87329.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_174_curated_33
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37900..40623)
DNA (2724bp) protein (908aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Uncharacterized protein {ECO:0000313|EMBL:AKC87484.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
Serine/threonine protein kinase id=2862879 bin=GWF1_Xanthomonadales_69_6 species=Frateuria aurantia genus=Frateuria taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_solids1_trim150_scaffold_174_curated_34
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40697..41932)
DNA (1236bp) protein (412aa)
Transmembrane Na+/H+ antiporter n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TID6_STEMA
Transmembrane Na+/H+ antiporter {ECO:0000313|EMBL:EMI48920.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
putative transmembrane Na+/H+ antiporter
scnpilot_solids1_trim150_scaffold_174_curated_35

Not on your lists

comp(42003..42878)
DNA (876bp) protein (292aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; TaxID=1424451 species="Bacteria.;" source="mixed culture bacterium CAR_AL_2.;"
L2 beta-lactamase (EC:3.5.2.6)
Putative L2 beta-lactamase n=2 Tax=unclassified Bacteria (miscellaneous) RepID=V5SK31_9BACT
scnpilot_solids1_trim150_scaffold_174_curated_36
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43050..43919
DNA (870bp) protein (290aa)
Transcriptional regulator, LysR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L6C0_9GAMM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EED38861.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
ampR; transcriptional activator AmpR
scnpilot_solids1_trim150_scaffold_174_curated_37
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43948..45825)
DNA (1878bp) protein (626aa)
Glutathione ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K010_STEMA
Glutathione ABC transporter ATP-binding protein {ECO:0000313|EMBL:EQM72413.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
putative ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
scnpilot_solids1_trim150_scaffold_174_curated_38
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46136..48526
DNA (2391bp) protein (797aa)
ligand-gated channel n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030BF1F6
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:AER55675.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
scnpilot_solids1_trim150_scaffold_174_curated_39
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48680..50377
DNA (1698bp) protein (566aa)
Monovalent cation:proton antiporter-2 (CPA2) family transporter n=3 Tax=Stenotrophomonas maltophilia RepID=J7VVW1_STEMA
putative transmembrane transport protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
Monovalent cation:proton antiporter-2 (CPA2) family transporter {ECO:0000313|EMBL:EJP80478.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
scnpilot_solids1_trim150_scaffold_174_curated_40
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50401..51306)
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WW53_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37164.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_174_curated_41
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51429..52079
DNA (651bp) protein (217aa)
NAD-dependent epimerase/dehydratase n=2 Tax=Delftia RepID=A9BYU4_DELAS
NAD-dependent epimerase/dehydratase; K07118
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KFJ11398.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
scnpilot_solids1_trim150_scaffold_174_curated_42
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52137..53477)
DNA (1341bp) protein (447aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AHY57979.1}; EC=2.5.1.49 {ECO:0000313|EMBL:AHY57979.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
O-acetylhomoserine aminocarboxypropyltransferase; K01740 O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E0925B
scnpilot_solids1_trim150_scaffold_174_curated_43
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53579..56164)
DNA (2586bp) protein (862aa)
Chaperone ClpB n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VVW6_STEMA
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
clpB; putative heat shock chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
scnpilot_solids1_trim150_scaffold_174_curated_44
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56551..57045
DNA (495bp) protein (165aa)
RNA polymerase sigma factor sigX n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM53_STEMA
RNA polymerase sigma factor {ECO:0000313|EMBL:AHY57977.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_174_curated_45
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57035..58036
DNA (1002bp) protein (334aa)
FecR family protein 6 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HPK9_ACHXA
Uncharacterized protein {ECO:0000313|EMBL:AHY57976.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
FecR family protein
scnpilot_solids1_trim150_scaffold_174_curated_46
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58156..60960
DNA (2805bp) protein (935aa)
TonB-dependent outer membrane receptor n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122 RepID=D4SQL7_9XANT
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EFF45533.1}; TaxID=427081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_174_curated_47
unknown

Not on your lists

60974..61276
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_174_curated_48
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61282..62454
DNA (1173bp) protein (391aa)
di-heme cytochrome c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase n=1 Tax=Lysobacter sp. ATCC 53042 RepID=F8TUF1_9GAMM
Cytochrome C peroxidase {ECO:0000313|EMBL:EYR69551.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_174_curated_49
unknown

Not on your lists

62509..62853
DNA (345bp) protein (115aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_174_curated_50
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62870..63718
DNA (849bp) protein (283aa)
UPF0276 protein Psesu_0929 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR35_PSEUU
hypothetical protein; K09930 hypothetical protein
UPF0276 protein Psesu_0929 {ECO:0000256|HAMAP-Rule:MF_00697}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_174_curated_51
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63715..64476
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WR34_PSEUU
hypothetical protein; K09929 hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADV26779.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_174_curated_52
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64634..65632)
DNA (999bp) protein (333aa)
cell envelope biogenesis protein TonB n=2 Tax=Xanthomonadaceae RepID=UPI00029A73FE
putative TonB-like protein; K03832 periplasmic protein TonB
Putative TonB-like protein {ECO:0000313|EMBL:CAQ46394.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
Displaying items 31-52 of 52 in total

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