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scnpilot_solids1_trim150_scaffold_174_curated_44

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 56551..57045

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigX n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CM53_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 163.0
  • Bit_score: 223
  • Evalue 1.50e-55
RNA polymerase sigma factor {ECO:0000313|EMBL:AHY57977.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 163.0
  • Bit_score: 229
  • Evalue 3.90e-57
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 151.0
  • Bit_score: 192
  • Evalue 9.00e-47

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCGGCCCGATCCGAAACCCTCGTCACGCTCTACCGTGACCACCACGCATGGCTCCGCGGCTGGCTCGCCGGCCGGCTCGGCTGTCGCGAAGTCGCGGCCGACCTCGCGCAGGATACGTTCGCGCGGCTGATGGCCGGGCGCGACCTGCAGGGCGTGCTGGAGCCGCGCGCCTACCTGACCACCATCGCCAAGGGCCTGATGGCCAACTGGTGCCGCCGCCAATCGCTGGAGCGCGCCTATCTGGAAAGCCTGGCGGCACTGCCCGAACCAAGCATGCCCTCGGCCGAGCATCAGGCGCTGGTCCGCGAGGCCCTGCACCTGATCGACGCCATGCTCGACAGCCTGCCCGGCGATGCCCGCCAGGTGTTCCTGCTGGCGCAGTTCGAAGGCATCGGCTACGACGAAATCGCCCGCCGGCTCGGCATCTCCCTGAGTACGGTCAAGCGCCACATGAAGCGCGCCCTCGTCGGCTGCCTGTCCCATGTGCCCTGA
PROTEIN sequence
Length: 165
MAARSETLVTLYRDHHAWLRGWLAGRLGCREVAADLAQDTFARLMAGRDLQGVLEPRAYLTTIAKGLMANWCRRQSLERAYLESLAALPEPSMPSAEHQALVREALHLIDAMLDSLPGDARQVFLLAQFEGIGYDEIARRLGISLSTVKRHMKRALVGCLSHVP*