ggKbase home page

scnpilot_solids1_trim150_scaffold_1495_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1495_curated_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..638)
DNA (636bp) protein (212aa)
ctaD; cytochrome c oxidase polypeptide I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome oxidase subunit I n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304D34A
Stenotrophomonas maltophilia strain ZBG7B contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87834.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_1495_curated_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(703..1635)
DNA (933bp) protein (311aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1]
Cytochrome c oxidase subunit 2 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KRE5_STEMA
scnpilot_solids1_trim150_scaffold_1495_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1653..2126)
DNA (474bp) protein (158aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000375CDC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCP14361.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
scnpilot_solids1_trim150_scaffold_1495_curated_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2424..5642
DNA (3219bp) protein (1073aa)
putA; proline dehydrogenase (EC:1.5.99.8 1.5.1.12); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12]
pyrroline-5-carboxylate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003016FAC
Integrase {ECO:0000313|EMBL:AHY60586.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_1495_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5715..6320)
DNA (606bp) protein (202aa)
Ribosyl nicotinamide transporter, PnuC-like n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KIQ3_STEMA
pnuC2; Ribosyl nicotinamide transporter, PnuC-like; K03811 nicotinamide mononucleotide transporter
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:KDE90727.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_1495_curated_6
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6445..7824)
DNA (1380bp) protein (460aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WX71_PSEUU
aromatic hydrocarbon degradation membrane protein; K06076 long-chain fatty acid transport protein
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:ADV28770.1}; Flags: Precursor;; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_1495_curated_7
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8040..8732
DNA (693bp) protein (231aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D50541
Putative Peptidase, S54 (Rhomboid) family {ECO:0000313|EMBL:EZP46503.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
putative rhomboid family transmembrane protein
scnpilot_solids1_trim150_scaffold_1495_curated_8
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8772..9095
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A0BDA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL04952.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_1495_curated_9
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9248..10651)
DNA (1404bp) protein (468aa)
Periplasmic carboxyl-terminal protease {ECO:0000313|EMBL:EKU24321.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EKU24321.1};; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Periplasmic carboxyl-terminal protease n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZF37_XANCT
scnpilot_solids1_trim150_scaffold_1495_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10766..12091)
DNA (1326bp) protein (442aa)
peptidase M23 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037E65F1
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEM49665.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
scnpilot_solids1_trim150_scaffold_1495_curated_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12138..14594
DNA (2457bp) protein (819aa)
aminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000362C0B6
Aminopeptidase {ECO:0000313|EMBL:AHY60593.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
Peptidase
scnpilot_solids1_trim150_scaffold_1495_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14622..14783
DNA (162bp) protein (54aa)
beta-ketoacyl-synthase I; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CRY8_STEMA
Beta-ketoacyl-[ACP] synthase I {ECO:0000313|EMBL:EZP45368.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
Displaying 12 items

View Taxonomy