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scnpilot_solids1_trim150_scaffold_891_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_891_curated_1
unknown

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3..95
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_891_curated_2
unknown

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comp(155..280)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_891_curated_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(277..1689)
DNA (1413bp) protein (471aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U0F3_STEMA
MFS transporter {ECO:0000313|EMBL:EMI51326.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_891_curated_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1769..2680
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VJA1_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP78339.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
putative LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_891_curated_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2735..3679)
DNA (945bp) protein (315aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
pip; putative proline iminopeptidase (EC:3.4.11.5); K01259 proline iminopeptidase [EC:3.4.11.5]
proline iminopeptidase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319E54B
scnpilot_solids1_trim150_scaffold_891_curated_6
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3757..6729)
DNA (2973bp) protein (991aa)
diguanylate cyclase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00037BB2A9
putative signal protein with GGDEF, PAS and PAC domains
Putative signal protein with GGDEF, PAS and PAC domains {ECO:0000313|EMBL:AEL08526.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_891_curated_7
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6846..10007)
DNA (3162bp) protein (1054aa)
Acr/RND family transmembrane transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030538DD
Multidrug transporter AcrB {ECO:0000313|EMBL:AHY57793.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
smeP; putative drug-resistance cell envelope-like protein
scnpilot_solids1_trim150_scaffold_891_curated_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10011..11132)
DNA (1122bp) protein (374aa)
RND transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E4588B
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACF53039.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
scnpilot_solids1_trim150_scaffold_891_curated_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11240..11905
DNA (666bp) protein (222aa)
TetR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DE58A6
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH14043.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
scnpilot_solids1_trim150_scaffold_891_curated_10
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12036..12683
DNA (648bp) protein (216aa)
pcm2; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
protein-L-isoaspartate O-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031DDC39
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:AHY57790.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_891_curated_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12708..14066
DNA (1359bp) protein (453aa)
TolC family type I secretion outer membrane protein n=2 Tax=Stenotrophomonas maltophilia RepID=M5THL3_STEMA
Protein CyaE {ECO:0000256|PIRNR:PIRNR001892}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
tolC; Type I secretion outer membrane protein, TolC precursor; K12340 outer membrane channel protein
scnpilot_solids1_trim150_scaffold_891_curated_12
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14167..15462)
DNA (1296bp) protein (432aa)
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EZP46756.1}; EC=2.-.-.- {ECO:0000313|EMBL:EZP46756.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L915_9GAMM
scnpilot_solids1_trim150_scaffold_891_curated_13
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15584..16510
DNA (927bp) protein (309aa)
Lipid A biosynthesis lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; EC=2.3.1.241 {ECO:0000256|HAMAP-Rule:MF_01942};; Kdo(2)-lipid IV(A) lauroyltransferase {ECO:0000256|HAMAP-Rule:MF_01942}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
waaM; lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
lauroyl acyltransferase n=1 Tax=Xanthomonas sacchari RepID=UPI000263037B
scnpilot_solids1_trim150_scaffold_891_curated_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16498..17841)
DNA (1344bp) protein (448aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003050B80
Membrane protein {ECO:0000313|EMBL:KGM56482.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
membrane protein
scnpilot_solids1_trim150_scaffold_891_curated_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17822..18934)
DNA (1113bp) protein (371aa)
Glycosyl transferase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L911_9GAMM
Glycosyl transferase {ECO:0000313|EMBL:EED39524.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_891_curated_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18943..19140)
DNA (198bp) protein (66aa)
Uncharacterized protein n=9 Tax=Stenotrophomonas RepID=B2FTT1_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE89512.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_891_curated_17
unknown

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19226..19375
DNA (150bp) protein (50aa)

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Displaying 17 items

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