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scnpilot_solids1_trim150_scaffold_116_curated

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_116_curated_1
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..186
DNA (186bp) protein (62aa)
pbpC; bifunctional penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
penicillin-binding protein 1C n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037BC175
Penicillin-binding protein {ECO:0000313|EMBL:AHY58115.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_116_curated_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(316..891)
DNA (576bp) protein (192aa)
Bacterioferritin n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9N5_9GAMM
Bacterioferritin {ECO:0000313|EMBL:EED37366.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
ferritin Dps family protein; K03594 bacterioferritin
scnpilot_solids1_trim150_scaffold_116_curated_3
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(923..1405)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VVJ3_STEMA
Peroxiredoxin {ECO:0000313|EMBL:AHY58117.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
putative redoxin
scnpilot_solids1_trim150_scaffold_116_curated_4
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1557..1997
DNA (441bp) protein (147aa)
Low molecular weight heat shock protein n=5 Tax=Xanthomonas campestris RepID=B0RYE2_XANCB
low molecular weight heat shock protein; K13993 HSP20 family protein
Low molecular weight heat shock protein {ECO:0000313|EMBL:AEL06150.1}; TaxID=990315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. raphani 756C.;"
scnpilot_solids1_trim150_scaffold_116_curated_5
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2123..3022
DNA (900bp) protein (300aa)
cytochrome C biogenesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CBECF
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHY58118.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
heat shock protein DnaJ domain-containing protein; K05516 curved DNA-binding protein
scnpilot_solids1_trim150_scaffold_116_curated_6
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3074..3460)
DNA (387bp) protein (129aa)
Putative two-component system response regulator, PilH family n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZB28_XANCT
Two-component system response regulator protein {ECO:0000313|EMBL:ELQ13226.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
two-component system response regulator protein; K02658 twitching motility two-component system response regulator PilH
scnpilot_solids1_trim150_scaffold_116_curated_7
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3546..4541)
DNA (996bp) protein (332aa)
quinone oxidoreductase n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000366D6C1
Quinone oxidoreductase {ECO:0000313|EMBL:AJC45609.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_8
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4688..5797
DNA (1110bp) protein (370aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D2E8CA
Membrane protein {ECO:0000313|EMBL:AHY58121.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_116_curated_9
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5794..6657
DNA (864bp) protein (288aa)
hflC; HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
membane protease HflC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E161D5
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
scnpilot_solids1_trim150_scaffold_116_curated_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6797..6982
DNA (186bp) protein (62aa)
Putative transmembrane protein n=3 Tax=Stenotrophomonas maltophilia RepID=B2FQG2_STRMK
putative transmembrane protein; K09937 hypothetical protein
Stenotrophomonas maltophilia strain ZBG7B contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86383.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_116_curated_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7214..8506
DNA (1293bp) protein (431aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
adenylosuccinate synthetase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003145087
scnpilot_solids1_trim150_scaffold_116_curated_12
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8888..11893)
DNA (3006bp) protein (1002aa)
NACHT domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J364_PSEUL
NACHT domain containing protein
NACHT domain protein {ECO:0000313|EMBL:BAK76509.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
scnpilot_solids1_trim150_scaffold_116_curated_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12215..12526)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00037A2F30
ATP-binding protein {ECO:0000313|EMBL:AKC85868.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
ATP/GTP-binding protein
scnpilot_solids1_trim150_scaffold_116_curated_14
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..12909)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Xanthomonas campestris pv. translucens RepID=K8ZDU0_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU23881.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_15
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13214..13840
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0SXS4_XANCT
Uncharacterized protein {ECO:0000313|EMBL:AJC44504.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13894..14232)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9C0I5_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD34429.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
scnpilot_solids1_trim150_scaffold_116_curated_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14246..15019)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003743611
Uncharacterized protein {ECO:0000313|EMBL:GAD24876.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_18
Cupriavidus oxalaticus, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15016..15516)
DNA (501bp) protein (167aa)
Putative transcription regulator n=1 Tax=Cupriavidus oxalaticus RepID=Q84ER0_9BURK
Putative transcription regulator {ECO:0000313|EMBL:CAD61124.1}; TaxID=96344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus oxalaticus.;"
uncharacterized HTH-type transcriptional regulator yetL-like
scnpilot_solids1_trim150_scaffold_116_curated_19
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..16471
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031D56FD
Uncharacterized protein {ECO:0000313|EMBL:AHY58128.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_20
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16538..16729)
DNA (192bp) protein (64aa)
HupB n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9Q1_9GAMM
HupB {ECO:0000313|EMBL:EED37955.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16888..17613
DNA (726bp) protein (242aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030B6DD4
Stenotrophomonas maltophilia strain ZBG7B contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86391.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
putative AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_116_curated_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17643..18071)
DNA (429bp) protein (143aa)
Death-on-curing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVZ1_9GAMM
Death-on-curing protein {ECO:0000313|EMBL:EIL91382.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
death-on-curing protein; K07341 death on curing protein
scnpilot_solids1_trim150_scaffold_116_curated_23
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18081..18302)
DNA (222bp) protein (74aa)
Putative addiction module antidote n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC76_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:KGM52511.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_24
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18486..21371)
DNA (2886bp) protein (962aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F0BE74
scnpilot_solids1_trim150_scaffold_116_curated_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21866..23089
DNA (1224bp) protein (408aa)
Putative Major Facilitator Superfamily drug resistance transmembrane translocase transporter n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FQE6_STRMK
Stenotrophomonas maltophilia strain ZBG7B contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP86395.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
bcr; putative major facilitator superfamily drug resistance transmembrane translocase transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
scnpilot_solids1_trim150_scaffold_116_curated_26
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23173..23589
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI0001CC067B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW76794.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
scnpilot_solids1_trim150_scaffold_116_curated_27
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23794..24297)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H260_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK22875.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_solids1_trim150_scaffold_116_curated_28
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24393..24971)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A446F
Uncharacterized protein {ECO:0000313|EMBL:KJE52687.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_29
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25658..26215)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GA06_SORC5
Dihydrofolate reductase {ECO:0000313|EMBL:AKF06480.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_116_curated_30
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26351..26671)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1NM41_9NEIS
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
Displaying items 1-30 of 107 in total

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