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scnpilot_solids1_trim150_scaffold_126_curated_19

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 20651..21910

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial assembly protein n=3 Tax=Xanthomonas RepID=U4LZ72_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 418.0
  • Bit_score: 687
  • Evalue 7.20e-195
PilC, fimbrial assembly protein {ECO:0000313|EMBL:EFF46697.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 418.0
  • Bit_score: 687
  • Evalue 1.00e-194
pilC; fimbrial assembly protein; K02653 type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 418.0
  • Bit_score: 680
  • Evalue 2.80e-193

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Taxonomy

Xanthomonas fuscans → Xanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTCCGCTACCCGCAGCGCAGTGAACAAACCGCCCGTGGATCGCAGCACCAGCCTGATGCAGCCGTTTGTCTGGGAGGGGACCGACAAACGCGGCGTGAAGATGAAGGGCGAACAGGAAGCCCGCAATGCCAACCTGCTGCGTGCCGAGCTGCGCAAGCTGGGCATCACCCCATCGGTGGTCAAACCCAAGCCCAAACCATTGTTCGGCGCCGCCGGCAAGCCCATCAAGGCCCGCGACATCGCCTTCTTCAGCCGCCAGATGGCGACCATGATGAAGTCTGGCGTGCCCATCGTGAGCGCGCTGGAGATCATCGGCAGCGGCCATAGAAACCCGCGCATGGCCAAGCTGGTGGGGCAGGTCCGCGCCGATCTGGAGGGCGGCTCCTCGCTGTACGAGGCCATCAGCAAGCACCCGGTTCAGTTCGACGAGCTGTACCGCAACCTGGTGCGGGCCGGCGAAGGCGCCGGCGTGCTGGAGACCGTGCTGGAAACCATCGCCAACTACCAGGAAAACCTGGAATCACTGAAAGGCAAGATCAAGAAGGCGCTGTTCTACCCGGCGATGGTCATCGTCGTCGCACTCCTGGTCAGCTCGGTGCTGCTGATGTGGGTCGTGCCGCAGTTCGAGGACATCTTCAAGAGCTTCGGCACGGAACTGCCGGTATTCACCCAGATGATCGTGGCGGCATCCCGCTTCATGGTCAGTTGGTGGTGGCTGATACTGCTGGCGTCGGTCGTGGGCGTGGGCGGTTCCATCTTCGCCTACAAGCGCAGCCCGAAGATGCAGTACGCGATGGATCGGCTGATCCTGAAGGTGCCGGTGATCGGCCAGATCATGCACAACAGCTCGATTGCCCGCTTCGCCCGCACCACGGCAGTGACCTTCAAGGCCGGCGTGCCGCTGGTCGAAGCCCTGGGGATCGTGGCCGGCGCCACCGGCAACAAGACCTATGAGGATGCCGTCCTGCACATGCGCGACGACGTGGCGGTGGGCTATCCGGTGAACATGGCCATGAAACAGGTGAACCTGTTCCCGCACATGGTGGTACAGATGACCGCCATCGGCGAGGAAGCCGGCGCACTGGACACCATGCTGTTCAAGGTGGCCGAGTACTTCGAACAGGAAGTGAACAATGCCGTGGATGCCTTGAGCAGCCTGATCGAACCGATAATCATGGTGTTCATCGGCGTCGTGGTCGGCAGCATGGTTGTCGGCATGTACCTGCCGATCTTCAAGCTCGCTTCCGTCGTTGGATAA
PROTEIN sequence
Length: 420
MSATRSAVNKPPVDRSTSLMQPFVWEGTDKRGVKMKGEQEARNANLLRAELRKLGITPSVVKPKPKPLFGAAGKPIKARDIAFFSRQMATMMKSGVPIVSALEIIGSGHRNPRMAKLVGQVRADLEGGSSLYEAISKHPVQFDELYRNLVRAGEGAGVLETVLETIANYQENLESLKGKIKKALFYPAMVIVVALLVSSVLLMWVVPQFEDIFKSFGTELPVFTQMIVAASRFMVSWWWLILLASVVGVGGSIFAYKRSPKMQYAMDRLILKVPVIGQIMHNSSIARFARTTAVTFKAGVPLVEALGIVAGATGNKTYEDAVLHMRDDVAVGYPVNMAMKQVNLFPHMVVQMTAIGEEAGALDTMLFKVAEYFEQEVNNAVDALSSLIEPIIMVFIGVVVGSMVVGMYLPIFKLASVVG*