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scnpilot_solids1_trim150_scaffold_126_curated_34

Organism: solids_Stenotrophomonas_1

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 35008..35421

Top 3 Functional Annotations

Value Algorithm Source
large conductance mechanosensitive channel protein MscL n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000312E2EF similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 137.0
  • Bit_score: 233
  • Evalue 9.40e-59
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 137.0
  • Bit_score: 225
  • Evalue 6.10e-56
large conductance mechanosensitive channel protein; K03282 large conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 224
  • Evalue 2.30e-56

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
GTGGGAATGATCAGTGAGTTCAAGGAGTTCGCGATGCGCGGCAACGTCATCGACCTGGCGGTCGGTGTCGTGATCGGCGGCGCGTTCGGCAAGATCGTCACCTCGCTGGTAGACAAGGTGATCATGCCGCCGATCGGCTGGCTGATCGGCAATGTCGATTTCTCCAAGCTGGCGTGGACGCTGGCGCCGGCGCGGGTAGCCACCGACGGCACCGAGATCCCGGCGGTGGTGGTCGGCTATGGCGACTTCATCAACACGGTGGTGCAGTTCGTCATCGTCGCCTTCGCCATCTTCATGGTGGTCAAGGTGGTCAACCGGCTGTCGCGCAAGAAGGAGGAGACGCCCGCCGCACCGGCCGCGCCGAGCGAGGAAGTGCTGTTGCTGCGCGAGATCCGCGACACCCTCAGGAAGTGA
PROTEIN sequence
Length: 138
VGMISEFKEFAMRGNVIDLAVGVVIGGAFGKIVTSLVDKVIMPPIGWLIGNVDFSKLAWTLAPARVATDGTEIPAVVVGYGDFINTVVQFVIVAFAIFMVVKVVNRLSRKKEETPAAPAAPSEEVLLLREIRDTLRK*