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scnpilot_solids1_trim150_scaffold_2201_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2201_curated_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1061)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5X0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69350.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type IV / vi secretion system, dotu
scnpilot_solids1_trim150_scaffold_2201_curated_2
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1065..2495)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBT7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AKC85909.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
hypothetical protein; K11893 type VI secretion system protein ImpJ
scnpilot_solids1_trim150_scaffold_2201_curated_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2554..3708)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6I3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69348.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
GumN family protein; K09973 hypothetical protein
scnpilot_solids1_trim150_scaffold_2201_curated_4
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3955..4647
DNA (693bp) protein (231aa)
Two component LuxR family transcriptional regulator n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCE0_9GAMM
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:EIT69347.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
transcriptional regulator, LuxR family
scnpilot_solids1_trim150_scaffold_2201_curated_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4755..6563
DNA (1809bp) protein (603aa)
3D domain-containing protein; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-]
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCC4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69332.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
scnpilot_solids1_trim150_scaffold_2201_curated_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6694..8529
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T6G7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69333.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein; K11896 type VI secretion system protein ImpG
scnpilot_solids1_trim150_scaffold_2201_curated_7
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8526..9137
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5V9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69335.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein; K11895 type VI secretion system protein ImpH
Displaying 7 items

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