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scnpilot_solids1_trim150_scaffold_4839_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4839_curated_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..450)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87021.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Protein of unknown function (DUF2878)
scnpilot_solids1_trim150_scaffold_4839_curated_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(447..1700)
DNA (1254bp) protein (418aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX19_9GAMM
methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AGG87378.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_4839_curated_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1697..2473)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87023.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4839_curated_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2470..3042)
DNA (573bp) protein (191aa)
Dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR4_9GAMM
Dehydrogenase {ECO:0000313|EMBL:EIL92005.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative NAD/FAD-binding protein
scnpilot_solids1_trim150_scaffold_4839_curated_5
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2984..3685)
DNA (702bp) protein (234aa)
Amine oxidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII3_9GAMM
NODE_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96819.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
putative NAD/FAD-binding protein
scnpilot_solids1_trim150_scaffold_4839_curated_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3687..4733)
DNA (1047bp) protein (349aa)
Fatty acid desaturase (EC:1.14.19.1); K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1]
Stearoyl-CoA desaturase (Delta-9 desaturase) {ECO:0000313|EMBL:CCP16567.1}; EC=1.14.19.1 {ECO:0000313|EMBL:CCP16567.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
Fatty acid desaturase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KNR2_STEMA
scnpilot_solids1_trim150_scaffold_4839_curated_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4796..5425
DNA (630bp) protein (210aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter sp. 115 RepID=I4VII6_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL87027.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_4839_curated_8
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5422..6096
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C97F0
Transcriptional regulator {ECO:0000313|EMBL:KGM53691.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
hypothetical protein; K07167 putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_4839_curated_9
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6190..6909)
DNA (720bp) protein (240aa)
GTP cyclohydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF45_9GAMM
GTP cyclohydrolase I family protein {ECO:0000313|EMBL:AJZ61459.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
GTP cyclohydrolase Itype 1
scnpilot_solids1_trim150_scaffold_4839_curated_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7014..7961)
DNA (948bp) protein (316aa)
Deoxyribodipyrimidine photolyase-like protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4WF44_9GAMM
Deoxyribodipyrimidine photolyase-like protein {ECO:0000313|EMBL:EIL98085.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
deoxyribodipyrimidine photolyase-like protein; K06876 deoxyribodipyrimidine photolyase-related protein
Displaying 10 items

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