ggKbase home page

scnpilot_solids1_trim150_scaffold_1808_curated_11

Organism: solids_Xanthomonadales_2

partial RP 17 / 55 MC: 2 BSCG 18 / 51 MC: 2 ASCG 7 / 38
Location: comp(9548..9907)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030B8E16 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 119.0
  • Bit_score: 209
  • Evalue 2.20e-51
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 119.0
  • Bit_score: 208
  • Evalue 1.20e-51
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 120.0
  • Bit_score: 218
  • Evalue 3.80e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Xanthomonadales_69_10_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCACGAGTCAAGCGTGGTGTCACGGCGCGCCGCCGTCACAAGAAAATCATCGGCCAGGCCAAGGGCTACTACAACGCCCGCCGCAAGGTCTTCCGCGTTGCCAAGCAGGCCGTCACCAAGGCCCTGCAGTACGCCTACATCGGCCGCAAGCAGAAGAAGCGCCATTTCCGCACCCTGTGGATTGCGCGTATCAATGCTGCTTCGCGCGCCAACGGCATGAGCTACAGCCGCTTCATGAACGGCCTGCTGAAGGCCGGGATCACCCTGGACCGCAAGGTGCTGGCGGACATCGCCGTGCACGACGCGGCGGGCTTTACCGCCCTGACCGAAAAGGCCAAGGGCGCTTTGGCGGCGTAA
PROTEIN sequence
Length: 120
MARVKRGVTARRRHKKIIGQAKGYYNARRKVFRVAKQAVTKALQYAYIGRKQKKRHFRTLWIARINAASRANGMSYSRFMNGLLKAGITLDRKVLADIAVHDAAGFTALTEKAKGALAA*