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SCNpilot_solid_2_scaffold_68

Search features with annotation key words

Displaying items 91-120 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_68_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102996..104318)
DNA (1323bp) protein (441aa)
Cell division protein ftsA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2S6_9BRAD rbh
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
ftsA; cell division protein FtsA; K03590 cell division protein FtsA rbh
SCNpilot_solid_2_scaffold_68_91
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104315..105289)
DNA (975bp) protein (325aa)
Cell division protein FtsQ n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2S7_9BRAD rbh
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia
ftsQ; cell division protein FtsQ; K03589 cell division protein FtsQ rbh
SCNpilot_solid_2_scaffold_68_92
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105256..106182)
DNA (927bp) protein (309aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] rbh
D-alanine--D-alanine ligase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYT1_AFIFE rbh
SCNpilot_solid_2_scaffold_68_93
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106344..107120
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLZ0_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31337.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_68_94
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107160..107945)
DNA (786bp) protein (262aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE39164.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADE39164.1};; TaxID=488538 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster;
Short-chain dehydrogenase/reductase SDR n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BSB7_PUNMI
SCNpilot_solid_2_scaffold_68_95
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108001..108915)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] rbh
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQD7_AFIFE rbh
SCNpilot_solid_2_scaffold_68_96
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108915..109394)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VLS6_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43437.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodops
SCNpilot_solid_2_scaffold_68_97
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109423..110829)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuram
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] rbh
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T1_9BRAD rbh
SCNpilot_solid_2_scaffold_68_98
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110906..112006)
DNA (1101bp) protein (367aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) rbh
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T2_9BRAD rbh
SCNpilot_solid_2_scaffold_68_99
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112032..113183)
DNA (1152bp) protein (384aa)
Cell division protein FtsW n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYS7_AFIFE rbh
Cell division protein FtsW {ECO:0000313|EMBL:EKS31333.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690
ftsW; cell division protein FtsW; K03588 cell division protein FtsW rbh
SCNpilot_solid_2_scaffold_68_100
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(113260..114657)
DNA (1398bp) protein (466aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T4_9BRAD rbh
SCNpilot_solid_2_scaffold_68_101
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114662..115747)
DNA (1086bp) protein (362aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] rbh
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T5_9BRAD rbh
SCNpilot_solid_2_scaffold_68_102
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115757..117193)
DNA (1437bp) protein (479aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobac
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T6_9BRAD rbh
SCNpilot_solid_2_scaffold_68_103
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117190..118632)
DNA (1443bp) protein (481aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] rbh
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T7_9BRAD rbh
SCNpilot_solid_2_scaffold_68_104
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118708..120447)
DNA (1740bp) protein (580aa)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:EFI52268.1}; EC=2.4.1.129 {ECO:0000313|EMBL:EFI52268.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhi
penA; penicillin-binding protein PenA; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] rbh
Peptidoglycan glycosyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T8_9BRAD rbh
SCNpilot_solid_2_scaffold_68_105
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120444..120854)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2T9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52269.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_68_106
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120851..121852)
DNA (1002bp) protein (334aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U0_9BRAD rbh
SCNpilot_solid_2_scaffold_68_107
unknown

Not on your lists

122114..122353
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_68_108
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122347..123120
DNA (774bp) protein (258aa)
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U1_9BRAD rbh
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:EFI52271.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
amidase rbh
SCNpilot_solid_2_scaffold_68_109
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123714..125300)
DNA (1587bp) protein (529aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U2_9BRAD rbh
Multidrug resistance protein B {ECO:0000313|EMBL:CEG07249.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
emrB; multidrug resistance protein B rbh
SCNpilot_solid_2_scaffold_68_110
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125319..126557)
DNA (1239bp) protein (413aa)
Secretion protein HlyD family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U3_9BRAD rbh
Multidrug resistance protein MdtN {ECO:0000313|EMBL:CEG07248.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
secretion protein HlyD family protein; K03543 multidrug resistance protein A rbh
SCNpilot_solid_2_scaffold_68_111
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126694..127317
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U4_9BRAD rbh
Potential acrAB operon repressor {ECO:0000313|EMBL:CEG07247.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
transcriptional regulator, TetR family rbh
SCNpilot_solid_2_scaffold_68_112
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127460..127627
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07246.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
SCNpilot_solid_2_scaffold_68_113
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127634..128836)
DNA (1203bp) protein (401aa)
Extensin family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U6_9BRAD rbh
Extensin family protein {ECO:0000313|EMBL:EFI52276.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
extensin family protein rbh
SCNpilot_solid_2_scaffold_68_114
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128960..130510
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52277.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_68_115
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130705..131217
DNA (513bp) protein (171aa)
Lytic transglycosylase catalytic n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U8_9BRAD rbh
Internal virion protein D {ECO:0000313|EMBL:CEG07243.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
putative transglycosylase
SCNpilot_solid_2_scaffold_68_116
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131251..131688)
DNA (438bp) protein (146aa)
acyl-CoA thioester hydrolase YciA (EC:3.1.2.-); K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2U9_9BRAD
Putative acyl-CoA thioester hydrolase {ECO:0000313|EMBL:CEG07242.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (
SCNpilot_solid_2_scaffold_68_117
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131710..133791)
DNA (2082bp) protein (694aa)
fadJ; fatty acid oxidation complex subunit alpha (EC:4.2.1.17 5.1.2.3 1.1.1.35); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1 rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV61_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31315.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_68_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133801..135084)
DNA (1284bp) protein (428aa)
fadA2; acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] rbh
Acetyl-CoA C-acetyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS94_AFIFE rbh
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EKS31314.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 5
SCNpilot_solid_2_scaffold_68_119
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135084..137348)
DNA (2265bp) protein (755aa)
fadE; acyl-coenzyme A dehydrogenase FadE (EC:1.3.99.-); K06445 acyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2V2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52282.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying items 91-120 of 139 in total

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