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SCNpilot_solid_2_scaffold_112

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Displaying items 91-118 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_112_91
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93763..94488
DNA (726bp) protein (242aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J5_9BRAD rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EFI51205.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
response regulator, two-component system sensor histidine kinase; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR rbh
SCNpilot_solid_2_scaffold_112_92
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94520..95908
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
two-component hybrid sensor and regulator; K07638 two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J6_9BRAD rbh
SCNpilot_solid_2_scaffold_112_93
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95915..96739)
DNA (825bp) protein (275aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
proC; pyrroline-5-carboxylate reductase ProC (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] rbh
Pyrroline-5-carboxylate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J7_9BRAD rbh
SCNpilot_solid_2_scaffold_112_94
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96849..97349)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09303.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_95
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97719..98714)
DNA (996bp) protein (332aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] rbh
Ribose-phosphate pyrophosphokinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7J9_9BRAD rbh
SCNpilot_solid_2_scaffold_112_96
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98822..99427)
DNA (606bp) protein (202aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09301.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_97
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99548..100312)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K1_9BRAD rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
hypothetical protein; K05810 conserved hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_98
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100309..101418)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09299.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_99
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101415..102281)
DNA (867bp) protein (289aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1035 sp
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] rbh
Prolipoprotein diacylglyceryl transferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K3_9BRAD rbh
SCNpilot_solid_2_scaffold_112_100
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102473..102727
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI51214.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_112_101
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102870..103952)
DNA (1083bp) protein (361aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K5_9BRAD rbh
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:CEG09296.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
putative response regulator protein rbh
SCNpilot_solid_2_scaffold_112_102
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


104264..104968
DNA (705bp) protein (235aa)
50S ribosomal protein L25 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT79_AFIFE rbh
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=883080 sp
50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 rbh
SCNpilot_solid_2_scaffold_112_103
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105151..105756
DNA (606bp) protein (202aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] rbh
Peptidyl-tRNA hydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K7_9BRAD rbh
SCNpilot_solid_2_scaffold_112_104
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105784..106881
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K8_9BRAD rbh
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
engD; GTP-dependent nucleic acid-binding protein EngD; K06942 rbh
SCNpilot_solid_2_scaffold_112_105
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106902..107210)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7K9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09292.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_112_106
unknown

Not on your lists

107300..107437
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_112_107
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107556..107957)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG09290.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_112_108
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108181..109101)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09289.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_109
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109310..110938
DNA (1629bp) protein (543aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L3_9BRAD rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI51223.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
ATP-binding protein of ABC transporter duplicated ATPase domains rbh
SCNpilot_solid_2_scaffold_112_110
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110935..111213)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80729.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
hypothetical protein
SCNpilot_solid_2_scaffold_112_111
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111226..111990)
DNA (765bp) protein (255aa)
Lipid A biosynthesis lauroyl acyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7M2_9BRAD rbh
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:ERF80728.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sour
restriction endonuclease family protein rbh
SCNpilot_solid_2_scaffold_112_112
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112036..114945)
DNA (2910bp) protein (970aa)
UvrABC system protein B n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L6_9BRAD rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B rbh
SCNpilot_solid_2_scaffold_112_113
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114985..116034)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BN30_OLICM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI05649.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_112_114
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116229..116927
DNA (699bp) protein (233aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Glutathione S-transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L8_9BRAD rbh
Disulfide-bond oxidoreductase YfcG {ECO:0000313|EMBL:CEG09282.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
SCNpilot_solid_2_scaffold_112_115
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116927..117622
DNA (696bp) protein (232aa)
Glutathione S-transferase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7L9_9BRAD rbh
Beta-aryl ether cleaving enzyme {ECO:0000313|EMBL:CEG09281.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
putative beta etherase rbh
SCNpilot_solid_2_scaffold_112_116
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117942..119414
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7M0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51230.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_112_117
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119418..120653
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7M1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09279.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_112_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120659..121447)
DNA (789bp) protein (263aa)
phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT68_AFIFE rbh
1-acylglycerol-3-phosphate O-acyltransferase {ECO:0000313|EMBL:EKS29423.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
Displaying items 91-118 of 118 in total

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