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SCNpilot_solid_2_scaffold_133

Search features with annotation key words

Displaying items 31-60 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_133_31
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28087..28539)
DNA (453bp) protein (151aa)
Maf-like protein AfiDRAFT_1524 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F7_9BRAD
Maf-like protein AfiDRAFT_1524 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS
Maf-like protein; K06287 septum formation protein
SCNpilot_solid_2_scaffold_133_32
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28700..29551)
DNA (852bp) protein (284aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F6_9BRAD rbh
putative phosphotransferase; K09773 hypothetical protein rbh
SCNpilot_solid_2_scaffold_133_33
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30098..30544
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F5_9BRAD
Putative membrane protein {ECO:0000313|EMBL:CEG10076.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
hypothetical protein; K08973 putative membrane protein
SCNpilot_solid_2_scaffold_133_34
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30833..32098
DNA (1266bp) protein (422aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=883080 specie
rho; transcription termination factor Rho (EC:3.6.1.-); K03628 transcription termination factor Rho rbh
Transcription termination factor Rho n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVI3_AFIFE rbh
SCNpilot_solid_2_scaffold_133_35
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32158..34212)
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI53533.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein; K06888 rbh
SCNpilot_solid_2_scaffold_133_36
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34315..35640
DNA (1326bp) protein (442aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
tRNA modification GTPase; K03650 tRNA modification GTPase [EC:3.6.-.-] rbh
tRNA modification GTPase MnmE n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F2_9BRAD rbh
SCNpilot_solid_2_scaffold_133_37
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35791..37665
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVJ1_AFIFE rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1035 species="Bacteria
mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme rbh
SCNpilot_solid_2_scaffold_133_38
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37678..38361
DNA (684bp) protein (228aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
rsmG; ribosomal RNA small subunit methyltransferase G (EC:2.1.1.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] rbh
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Afipia felis ATCC 53690 RepID=K8NP84_AFIFE rbh
SCNpilot_solid_2_scaffold_133_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38358..39206
DNA (849bp) protein (283aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E9_9BRAD rbh
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:CEG10082.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein rbh
SCNpilot_solid_2_scaffold_133_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39350..40240
DNA (891bp) protein (297aa)
ParB-like partition protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM83_AFIFE rbh
ParB-like partition protein {ECO:0000313|EMBL:EKS30216.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 5369
ParB family protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_solid_2_scaffold_133_41
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40312..42024)
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI53527.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_133_42
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42149..43177)
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] rbh
DNA polymerase III, delta subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E6_9BRAD rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EFI53526.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
SCNpilot_solid_2_scaffold_133_43
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43187..43741)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10085.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein; K03643 LPS-assembly lipoprotein rbh
SCNpilot_solid_2_scaffold_133_44
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(43728..46352)
DNA (2625bp) protein (875aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=666684 species="Bacteria; Proteob
leuS; leucin-tRNA ligase LeuS (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] rbh
Leucine--tRNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E4_9BRAD rbh
SCNpilot_solid_2_scaffold_133_45
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46531..48222)
DNA (1692bp) protein (564aa)
Diguanylate cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E3_9BRAD rbh
Bacteriophytochrome cph2 {ECO:0000313|EMBL:CEG10087.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
cph; phytochrome-like protein Cph rbh
SCNpilot_solid_2_scaffold_133_46
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48333..49022
DNA (690bp) protein (230aa)
Alanine racemase domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1E2_9BRAD rbh
Alanine racemase domain protein {ECO:0000313|EMBL:EFI53522.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
hypothetical protein; K06997 rbh
SCNpilot_solid_2_scaffold_133_47
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49095..49664)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVK4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30223.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_133_48
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49786..50472
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family n=2 Tax=Afipia RepID=D6V1E0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30224.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
two component transcriptional regulator, winged helix family rbh
SCNpilot_solid_2_scaffold_133_49
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50538..50978
DNA (441bp) protein (147aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D9_9BRAD
HTH-type transcriptional regulator Cmr {ECO:0000313|EMBL:CEG10091.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
cyclic nucleotide-binding domain-containing protein
SCNpilot_solid_2_scaffold_133_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51087..51902)
DNA (816bp) protein (272aa)
exodeoxyribonuclease III xth; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Exodeoxyribonuclease III Xth n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D8_9BRAD rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:CEG10092.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
SCNpilot_solid_2_scaffold_133_51
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51981..52586)
DNA (606bp) protein (202aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D5_9BRAD rbh
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
outer membrane lipoprotein carrier protein LolA rbh
SCNpilot_solid_2_scaffold_133_52
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53081..55534)
DNA (2454bp) protein (818aa)
DNA translocase FtsK n=2 Tax=Oligotropha carboxidovorans RepID=B6JAH6_OLICO rbh
DNA translocase FtsK {ECO:0000313|EMBL:AEI04906.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovor
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family rbh
SCNpilot_solid_2_scaffold_133_53
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55544..56776)
DNA (1233bp) protein (411aa)
Aminotransferase class I and II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D3_9BRAD rbh
Aminotransferase class I and II {ECO:0000313|EMBL:EFI53513.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
class I and II aminotransferase rbh
SCNpilot_solid_2_scaffold_133_54
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57050..58525)
DNA (1476bp) protein (492aa)
Ammonium transporter n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRZ3_AFIFE rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
amtB2; ammonium transporter; K03320 ammonium transporter, Amt family rbh
SCNpilot_solid_2_scaffold_133_55
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58566..58904)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D1_9BRAD
Nitrogen regulatory protein P-II 2 {ECO:0000313|EMBL:CEG10099.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
nitrogen regulatory protein P-II (GlnB, GlnK); K04752 nitrogen regulatory protein P-II 2
SCNpilot_solid_2_scaffold_133_56
unknown

Not on your lists

comp(59337..59519)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_133_57
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59598..60329
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I8H9_RHOVT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
SCNpilot_solid_2_scaffold_133_58
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60636..61946)
DNA (1311bp) protein (437aa)
Ammonium transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D0_9BRAD rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia s
putative ammonium transporter; K03320 ammonium transporter, Amt family rbh
SCNpilot_solid_2_scaffold_133_59
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62008..62346)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1C9_9BRAD
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFI53509.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
nitrogen regulatory protein PII; K04752 nitrogen regulatory protein P-II 2
SCNpilot_solid_2_scaffold_133_60
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62466..63350)
DNA (885bp) protein (295aa)
acyl-coa thioesterase (EC:3.1.2.-); K10805 acyl-CoA thioesterase II [EC:3.1.2.-] rbh
Acyl-CoA thioesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1C8_9BRAD rbh
Acyl-CoA thioesterase {ECO:0000313|EMBL:EFI53508.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
Displaying items 31-60 of 200 in total

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