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SCNpilot_solid_2_scaffold_133

Search features with annotation key words

Displaying items 1-30 of 200 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_133_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1038..1307
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMF8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30281.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_133_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1300..1596
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAM9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI50523.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_133_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1700..1903
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAM8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07532.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_133_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1931..2659
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030CD804 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41259.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
signal transduction histidine kinase
SCNpilot_solid_2_scaffold_133_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2809..4998)
DNA (2190bp) protein (730aa)
Amylo-alpha-16-glucosidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8H4_9BRAD rbh
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:CEG08664.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
amylo-alpha-16-glucosidase rbh
SCNpilot_solid_2_scaffold_133_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4991..6103)
DNA (1113bp) protein (371aa)
Glycosyl transferase group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8H5_9BRAD rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EFI50860.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
group 1 glycosyl transferase rbh
SCNpilot_solid_2_scaffold_133_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6380..6604
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ19_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30277.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_133_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6730..7002
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMF3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30276.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_133_9
unknown

Not on your lists

8732..8893
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_133_10
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8983..10830)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZI8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33894.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
site-specific recombinase rbh
SCNpilot_solid_2_scaffold_133_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11129..12403
DNA (1275bp) protein (425aa)
Mg chelatase-like protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRS9_AFIFE rbh
Mg chelatase-like protein {ECO:0000313|EMBL:EKS30185.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.
Mg chelatase-like protein; K07391 magnesium chelatase family protein
SCNpilot_solid_2_scaffold_133_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12490..12969
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10055.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_133_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13090..15330
DNA (2241bp) protein (747aa)
dhkJ; hybrid signal transduction histidine kinase J (EC:2.7.13.3) rbh
Multi-sensor hybrid histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H5_9BRAD rbh
Signal transduction histidine-protein kinase BarA {ECO:0000313|EMBL:CEG10056.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
SCNpilot_solid_2_scaffold_133_14
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15454..16104
DNA (651bp) protein (217aa)
ornithine-acyl ACP N-acyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002FC5A3C
Uncharacterized protein {ECO:0000313|EMBL:CEG10057.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_133_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..16347
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVF6_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS30188.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_133_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16344..17300)
DNA (957bp) protein (319aa)
Pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_00215, ECO:0000256|RuleBase:RU003530};; Pantothenic acid kinase {ECO:000025
coaA; pantothenate kinase CoaA (EC:2.7.1.33); K00867 type I pantothenate kinase [EC:2.7.1.33] rbh
Pantothenate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H3_9BRAD rbh
SCNpilot_solid_2_scaffold_133_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..17700)
DNA (330bp) protein (110aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H2_9BRAD
SCNpilot_solid_2_scaffold_133_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17789..18565)
DNA (777bp) protein (259aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
hisF; imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-); K02500 cyclase [EC:4.1.3.-] rbh
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1H1_9BRAD rbh
SCNpilot_solid_2_scaffold_133_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18566..19303)
DNA (738bp) protein (246aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [ rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NII6_AFIFE rbh
SCNpilot_solid_2_scaffold_133_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19300..19950)
DNA (651bp) protein (217aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-] rbh
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G9_9BRAD rbh
SCNpilot_solid_2_scaffold_133_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19947..20438)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53548.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_133_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20468..21061)
DNA (594bp) protein (198aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] rbh
Imidazoleglycerol-phosphate dehydratase {ECO:0000255|HAMAP-Rule:MF_00076}; Short=IGPD {ECO:0000255|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000255|HAMAP-Rule:MF_00076};; TaxID=504832 species="Bacteria
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Oligotropha carboxidovorans RepID=HIS7_OLICO rbh
SCNpilot_solid_2_scaffold_133_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21254..21805
DNA (552bp) protein (184aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1035 species=
hslV; ATP-dependent protease HslV (EC:3.4.25.-); K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
ATP-dependent protease subunit HslV n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G6_9BRAD rbh
SCNpilot_solid_2_scaffold_133_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21813..23114
DNA (1302bp) protein (434aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G4_9BRAD rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=666684 species="Bacteria; Proteobac
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU rbh
SCNpilot_solid_2_scaffold_133_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23318..23917)
DNA (600bp) protein (200aa)
Smr protein/MutS2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G3_9BRAD rbh
Recombination and DNA strand exchange inhibitor protein {ECO:0000313|EMBL:CEG10068.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
Smr domain protein
SCNpilot_solid_2_scaffold_133_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23914..25170)
DNA (1257bp) protein (419aa)
mltA; membrane-bound lytic murein transglycosylase A; K08304 membrane-bound lytic murein transglycosylase A [EC:3.2.1.-] rbh
MltA domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G2_9BRAD rbh
Membrane-bound lytic murein transglycosylase A {ECO:0000313|EMBL:CEG10069.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
SCNpilot_solid_2_scaffold_133_27
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25280..25984)
DNA (705bp) protein (235aa)
Import inner membrane translocase subunit Tim44 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G1_9BRAD rbh
Mitochondrial import inner membrane, translocase subunit {ECO:0000313|EMBL:CEG10070.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sou
hypothetical protein rbh
SCNpilot_solid_2_scaffold_133_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26249..26725
DNA (477bp) protein (159aa)
Protein-export protein SecB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1G0_9BRAD rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
secB; preprotein translocase subunit SecB; K03071 preprotein translocase subunit SecB
SCNpilot_solid_2_scaffold_133_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26766..27458)
DNA (693bp) protein (231aa)
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
DNA polymerase III, epsilon subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F9_9BRAD rbh
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:CEG10072.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
SCNpilot_solid_2_scaffold_133_30
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27478..28077)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=666684 species="Bacteria; Pr
coaE; dephospho-CoA kinase CoaE (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1F8_9BRAD rbh
Displaying items 1-30 of 200 in total

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