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SCNpilot_solid_2_scaffold_159

Search features with annotation key words

Displaying items 61-90 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_159_61
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52479..53048)
DNA (570bp) protein (190aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI79_AFIFE rbh
RNA polymerase sigma factor CarQ {ECO:0000313|EMBL:CEG08526.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_solid_2_scaffold_159_62
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53364..54503
DNA (1140bp) protein (380aa)
Diguanylate cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5B1_9BRAD rbh
Diguanylate cyclase {ECO:0000313|EMBL:EFI51508.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
diguanylate cyclase rbh
SCNpilot_solid_2_scaffold_159_63
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54554..55660
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5B0_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51507.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_159_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55657..56295)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI51506.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_159_65
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56292..56843)
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A8_9BRAD rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFI51505.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
putative RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_solid_2_scaffold_159_66
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

57053..57715
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRE1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28753.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_159_67
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57705..59543)
DNA (1839bp) protein (613aa)
Acetyl-CoA hydrolase/transferase family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A6_9BRAD rbh
Succinyl-CoA:coenzyme A transferase {ECO:0000313|EMBL:CEG08532.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Ca
hypothetical protein rbh
SCNpilot_solid_2_scaffold_159_68
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59815..61173
DNA (1359bp) protein (453aa)
Type I secretion outer membrane protein, TolC family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A5_9BRAD rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EFI51502.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
tolC; outer membrane efflux protein TolC; K12340 outer membrane channel protein rbh
SCNpilot_solid_2_scaffold_159_69
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61188..64319)
DNA (3132bp) protein (1044aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A4_9BRAD rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EFI51501.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1N
czcA2; cation efflux system protein CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
SCNpilot_solid_2_scaffold_159_70
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64437..65630)
DNA (1194bp) protein (398aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A3_9BRAD rbh
Cation efflux system protein CzcB {ECO:0000313|EMBL:CEG08536.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
membrane fusion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
SCNpilot_solid_2_scaffold_159_71
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65933..67108)
DNA (1176bp) protein (392aa)
Amidohydrolase {ECO:0000313|EMBL:EFI51499.1}; EC=3.5.1.32 {ECO:0000313|EMBL:EFI51499.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32] rbh
Amidohydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A2_9BRAD rbh
SCNpilot_solid_2_scaffold_159_72
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67238..68857
DNA (1620bp) protein (540aa)
glucose-methanol-choline oxidoreductase (EC:1.1.99.-) rbh
Glucose-methanol-choline oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5A1_9BRAD rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EFI51498.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
SCNpilot_solid_2_scaffold_159_73
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69016..69252
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NML9_AFIFE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06122.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_159_74
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69605..70996)
DNA (1392bp) protein (464aa)
class III aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13] rbh
Aminotransferase class-III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V598_9BRAD rbh
Aminotransferase class-III {ECO:0000313|EMBL:EFI51495.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_159_75
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71121..71738
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V597_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG08542.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_159_76
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71688..74270)
DNA (2583bp) protein (861aa)
Hopanoid biosynthesis associated RND transporter like protein HpnN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V596_9BRAD rbh
Hopanoid biosynthesis associated RND transporter like protein HpnN {ECO:0000313|EMBL:CEG08543.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
hpnN; hopanoid biosynthesis associated RND transporter like protein HpnN; K07003 rbh
SCNpilot_solid_2_scaffold_159_77
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74507..76423
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) rbh
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V595_9BRAD rbh
SCNpilot_solid_2_scaffold_159_78
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76389..77393
DNA (1005bp) protein (335aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxI
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V594_9BRAD rbh
SCNpilot_solid_2_scaffold_159_79
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77412..78602
DNA (1191bp) protein (397aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Afipia sp. 1NLS2 RepID=D6V593_9BRAD rbh
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EFI51490.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;"
radical SAM domain-containing protein rbh
SCNpilot_solid_2_scaffold_159_80
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78773..79492)
DNA (720bp) protein (240aa)
Hopanoid-associated phosphorylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V591_9BRAD rbh
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:CEG08548.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
hypothetical protein rbh
SCNpilot_solid_2_scaffold_159_81
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79498..81459)
DNA (1962bp) protein (654aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] rbh
Squalene-hopene cyclase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK24_AFIFE rbh
Squalene-hopene cyclase {ECO:0000313|EMBL:EKS28769.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_159_82
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81473..82738)
DNA (1266bp) protein (422aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V589_9BRAD rbh
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EFI51486.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afip
hpnE; squalene-associated FAD-dependent desaturase rbh
SCNpilot_solid_2_scaffold_159_83
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82738..83565)
DNA (828bp) protein (276aa)
Squalene synthase HpnD {ECO:0000313|EMBL:EFI51485.1}; EC=2.5.1.32 {ECO:0000313|EMBL:EFI51485.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A
putative squalene/phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] rbh
Squalene synthase HpnD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V588_9BRAD rbh
SCNpilot_solid_2_scaffold_159_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83573..84451)
DNA (879bp) protein (293aa)
Squalene synthase HpnC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V587_9BRAD rbh
Squalene synthase HpnC {ECO:0000313|EMBL:CEG08552.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch dis
putative squalene/phytoene synthase rbh
SCNpilot_solid_2_scaffold_159_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84640..86229)
DNA (1590bp) protein (530aa)
Radical SAM domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V586_9BRAD rbh
B12-binding domain/radical SAM domain protein, family {ECO:0000313|EMBL:CEG08553.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
methylthiotransferase rbh
SCNpilot_solid_2_scaffold_159_86
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86418..87236
DNA (819bp) protein (273aa)
Protein FdhD homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V585_9BRAD rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" so
FdhD family protein; K02379 FdhD protein rbh
SCNpilot_solid_2_scaffold_159_87
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87293..88048
DNA (756bp) protein (252aa)
UPF0176 protein AfiDRAFT_1767 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V584_9BRAD rbh
UPF0176 protein AfiDRAFT_1767 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2
rhodanese-like domain-containing protein; K07146 UPF0176 protein rbh
SCNpilot_solid_2_scaffold_159_88
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88002..88256
DNA (255bp) protein (85aa)
Protein SlyX homolog n=1 Tax=Afipia sp. 1NLS2 RepID=D6V583_9BRAD
Protein SlyX homolog {ECO:0000256|HAMAP-Rule:MF_00715}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SlyX family protein; K03745 SlyX protein
SCNpilot_solid_2_scaffold_159_89
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88365..89219)
DNA (855bp) protein (285aa)
Aldo/keto reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V582_9BRAD rbh
Aldo/keto reductase {ECO:0000313|EMBL:EFI51479.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
aldo/keto reductase family protein rbh
SCNpilot_solid_2_scaffold_159_90
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89298..90818)
DNA (1521bp) protein (507aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brady
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
Glycerol-3-phosphate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V581_9BRAD rbh
Displaying items 61-90 of 100 in total

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