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SCNpilot_solid_2_scaffold_322

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_322_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108..1220)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQX8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28628.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ATP-binding protein; K03593 ATP-binding protein involved in chromosome partitioning rbh
SCNpilot_solid_2_scaffold_322_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1473..2114
DNA (642bp) protein (214aa)
TIGR00153 family protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJJ1_AFIFE rbh
TIGR00153 family protein {ECO:0000313|EMBL:EKS28629.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;
putative phosphate transport regulator; K07220 hypothetical protein rbh
SCNpilot_solid_2_scaffold_322_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2127..3131
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NM68_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28630.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative low-affinity inorganic phosphate transporter Pit; K03306 inorganic phosphate transporter, PiT family rbh
SCNpilot_solid_2_scaffold_322_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3156..3863
DNA (708bp) protein (236aa)
MgtC/SapB transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N3_9BRAD rbh
MgtC/SapB transporter {ECO:0000313|EMBL:EFI51630.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
MgtC family membrane protein; K07507 putative Mg2+ transporter-C (MgtC) family protein rbh
SCNpilot_solid_2_scaffold_322_5
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4025..5602
DNA (1578bp) protein (526aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
sensor signal transduction histidine kinase; K07716 two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3] rbh
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N2_9BRAD rbh
SCNpilot_solid_2_scaffold_322_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5640..6149
DNA (510bp) protein (170aa)
TIGR02281 family clan AA aspartic protease n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQY5_AFIFE rbh
TIGR02281 family clan AA aspartic protease {ECO:0000313|EMBL:EKS28633.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_322_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6150..7148)
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
dusA; tRNA-dihydrouridine synthase A (EC:1.-.-.-); K05539 tRNA-dihydrouridine synthase A [EC:1.-.-.-] rbh
tRNA-dihydrouridine synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJJ4_AFIFE rbh
SCNpilot_solid_2_scaffold_322_8
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7549..7905
DNA (357bp) protein (119aa)
Membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JE26_OLICO
membrane protein; K09790 hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:AEI06230.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_322_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..8736)
DNA (738bp) protein (246aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L9_9BRAD rbh
LIV-I protein F {ECO:0000313|EMBL:CEG08412.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease ba
ABC transporter rbh
SCNpilot_solid_2_scaffold_322_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8733..9467)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NHU4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28636.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ABC transporter rbh
SCNpilot_solid_2_scaffold_322_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9464..10411)
DNA (948bp) protein (316aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L7_9BRAD rbh
Leucine/isoleucine/valine transporter permease subunit {ECO:0000313|EMBL:CEG08415.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sourc
inner-membrane translocator rbh
SCNpilot_solid_2_scaffold_322_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10408..11271)
DNA (864bp) protein (288aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L6_9BRAD rbh
Inner-membrane translocator {ECO:0000313|EMBL:EFI51613.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
inner-membrane translocator rbh
SCNpilot_solid_2_scaffold_322_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11318..12541)
DNA (1224bp) protein (408aa)
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L5_9BRAD rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51612.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_322_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12776..14050)
DNA (1275bp) protein (425aa)
frc; formyl-coenzyme A transferase Frc (EC:2.8.3.16) rbh
Formyl-CoA:oxalate CoA-transferase; Short=FCOCT;; EC=2.8.3.16 {ECO:0000255|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO:0000255|HAMAP-Rule:MF_00742}; Short=Formyl-CoA transferase {ECO:000
Formyl-coenzyme A transferase n=2 Tax=Oligotropha carboxidovorans RepID=FCTA_OLICO rbh
SCNpilot_solid_2_scaffold_322_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14127..15866)
DNA (1740bp) protein (580aa)
oxc; oxalyl-CoA decarboxylase (EC:4.1.1.8); K01577 oxalyl-CoA decarboxylase [EC:4.1.1.8] rbh
Oxalyl-CoA decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L3_9BRAD rbh
Oxalyl-CoA decarboxylase {ECO:0000313|EMBL:EFI51610.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_322_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16521..17825
DNA (1305bp) protein (435aa)
Oxalate/formate antiporter n=2 Tax=Oligotropha carboxidovorans RepID=B6JE31_OLICO rbh
oxalate/formate antiporter; K08177 MFS transporter, OFA family, oxalate/formate antiporter rbh
Oxalate:formate antiporter {ECO:0000313|EMBL:AEI06225.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carbox
SCNpilot_solid_2_scaffold_322_17
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18131..20263
DNA (2133bp) protein (711aa)
CoA-binding n=2 Tax=Oligotropha carboxidovorans RepID=B6JE32_OLICO rbh
CoA-binding protein rbh
CoA-binding domain protein {ECO:0000313|EMBL:AEI06224.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carbox
SCNpilot_solid_2_scaffold_322_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20277..21473
DNA (1197bp) protein (399aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC3; succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L0_9BRAD rbh
SCNpilot_solid_2_scaffold_322_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21478..22386
DNA (909bp) protein (303aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizo
succinyl-CoA ligase (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K9_9BRAD rbh
SCNpilot_solid_2_scaffold_322_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22503..23258
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NDF8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS28647.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
GntR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_322_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23352..24125)
DNA (774bp) protein (258aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K7_9BRAD rbh
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:EFI51604.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
fumarylacetoacetate hydrolase family protein rbh
SCNpilot_solid_2_scaffold_322_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24166..25575)
DNA (1410bp) protein (470aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia
ttuE; pyruvate kinase TtuE (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] rbh
Pyruvate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K6_9BRAD rbh
SCNpilot_solid_2_scaffold_322_23
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25747..26766)
DNA (1020bp) protein (340aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo
putative 2-dehydropantoate 2-reductase; K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169] rbh
2-dehydropantoate 2-reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K5_9BRAD rbh
SCNpilot_solid_2_scaffold_322_24
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26828..27718)
DNA (891bp) protein (297aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EFI51601.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EFI51601.1};; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
glxR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K4_9BRAD rbh
SCNpilot_solid_2_scaffold_322_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27761..28531)
DNA (771bp) protein (257aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
hyi; hydroxypyruvate isomerase (EC:5.3.1.22); K01816 hydroxypyruvate isomerase [EC:5.3.1.22] rbh
Hydroxypyruvate isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K3_9BRAD rbh
SCNpilot_solid_2_scaffold_322_26
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28585..30378)
DNA (1794bp) protein (598aa)
gcl; glyoxylate carboligase (EC:4.1.1.47); K01608 tartronate-semialdehyde synthase [EC:4.1.1.47] rbh
Glyoxylate carboligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K2_9BRAD rbh
Glyoxylate carboligase {ECO:0000313|EMBL:EFI51599.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_322_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30594..31418
DNA (825bp) protein (275aa)
Transcriptional regulator, IclR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K1_9BRAD rbh
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EFI51598.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
iclR; acetate operon repressor; K13641 IclR family transcriptional regulator, acetate operon repressor rbh
SCNpilot_solid_2_scaffold_322_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31471..31824
DNA (354bp) protein (118aa)
Glutathione-dependent formaldehyde-activating GFA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5K0_9BRAD
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:EFI51597.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="
hypothetical protein
SCNpilot_solid_2_scaffold_322_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32038..32919)
DNA (882bp) protein (294aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
sucD3; succinyl-CoA ligase [ADP-forming] subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5J9_9BRAD rbh
SCNpilot_solid_2_scaffold_322_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32921..34093)
DNA (1173bp) protein (391aa)
sucC2; succinyl-CoA ligase subunit beta (EC:6.2.1.5); K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] rbh
Succinate--CoA ligase (ADP-forming) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5J8_9BRAD rbh
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000313|EMBL:CEG08436.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
Displaying items 1-30 of 50 in total

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