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SCNpilot_solid_2_scaffold_28_64

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 76462..77832

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V644_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 456.0
  • Bit_score: 818
  • Evalue 3.90e-234
  • rbh
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:CEG08211.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 456.0
  • Bit_score: 821
  • Evalue 8.40e-235
C4-dicarboxylate transport transcriptional regulatory protein DctD similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 451.0
  • Bit_score: 657
  • Evalue 3.60e-186
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGACACAAAGCGCAGCATCGAACGATCGCCCTTCCGTCGTCCTGCTGGATGACGACCGCGATCTTCTCAAGGCGACGCAGCAGACGCTGGAGCTTGCCGGATTTCAGGTGCAGACCTTCACGGCGGCGGCGAACGCGCTCGCGTTGCTCAATCGACACTTCAACGGCGTCGTCGTGTCCGACGTCCGCATGCCTGGCGTCGACGGACTGCAGTTTTTCCGACGCCTGCGCGAAATCGATTCCGATATTCCAGTCATCCTCATCACCGGCCACGGCGATATTCCAATGGCGGTGAAGGCCATTCAGGATGGCGCGTATGATTTCATTACAAAGCCGTTCGCCGCTGAGCGGTTGGTACACAGCGTGCGGCATGCAGCGGAGAAGCGACAACTGGTGATGGAGAACCGCACGCTGCGTGAAGCGGCGGACGAGGCAGAGAATGGCCTGCCTCTGATCGGTCAGTCTCCTGCCATGGAGTGGCTGCGCCACACGCTGCGCCAGATCGCCGATACCGATGTCGACGTGCTGGTGACGGGAGAAACCGGTTCCGGCAAGGAGGTGGTGGCAACGCTGCTGCACCGCTGGAGCCGCCGCCGTGCCGCTAACAATTTCGTTGCACTCAATTGCAGCGCGCTGCCAGAGAGTATCATCGAGAGCGAGCTGTTCGGCCACGAGCAAGGCGCCTTCACCGGCGCCCAGAAGCAGCGGCTCGGGCGTATCCAGCATGCCGATGGTGGCACGCTATTCCTCGACGAGATCGAAAGCATGCCGCCGTCAGTCCAGGTGCAGATGCTGCGCGTACTGGAAATGCGCGAGGTCGCGCCACTAGGCACCAATGAAATCCGTCCGGTCGACCTGCGTATCGTTGCCGCCTCAAAGATCGATCTCGGCGACCCCGCCGAGCGCGGTGACTTTCGCGAGGATCTCTACTACCGCCTCAACGTCGTGACGCTATCGATCCCTCCGCTGCGAGAACGGCGAGGCGATATTCCGATGTTGTTCGGGTATTTCACTAACCGCGCCGCCATACGCTTCCAGCGGACAATGCCCGACATTCCGGCTTCCGTGCATCGTTATTTGCGCGATCACCATTGGCCGGGGAACGTGCGGGAGCTGTCGCATTTTGCCGAACGTTTCGTACTCGGCCTCGATCAGGAAATGCAGGAAAACGCCGGAAGATGCTCCGAAGACATGCTGCCTTTGCCGGAGCGGCTGGAGCGGTTCGAAGCAACTGCCATCCGCGATGCGCTGGAGAGCCATGACGGCGATGTTCGCCGGACCATCGAAGCTCTCGGGATTCCGCGCAAAACATTCTACGACAAACTGCAGCGCCATGGCATCGTCCGCAGCACTTTCTCGAAAACCGATTGA
PROTEIN sequence
Length: 457
MTQSAASNDRPSVVLLDDDRDLLKATQQTLELAGFQVQTFTAAANALALLNRHFNGVVVSDVRMPGVDGLQFFRRLREIDSDIPVILITGHGDIPMAVKAIQDGAYDFITKPFAAERLVHSVRHAAEKRQLVMENRTLREAADEAENGLPLIGQSPAMEWLRHTLRQIADTDVDVLVTGETGSGKEVVATLLHRWSRRRAANNFVALNCSALPESIIESELFGHEQGAFTGAQKQRLGRIQHADGGTLFLDEIESMPPSVQVQMLRVLEMREVAPLGTNEIRPVDLRIVAASKIDLGDPAERGDFREDLYYRLNVVTLSIPPLRERRGDIPMLFGYFTNRAAIRFQRTMPDIPASVHRYLRDHHWPGNVRELSHFAERFVLGLDQEMQENAGRCSEDMLPLPERLERFEATAIRDALESHDGDVRRTIEALGIPRKTFYDKLQRHGIVRSTFSKTD*