ggKbase home page

SCNpilot_solid_2_scaffold_28_70

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(82326..83504)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V633_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 392.0
  • Bit_score: 704
  • Evalue 5.40e-200
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI51780.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 392.0
  • Bit_score: 704
  • Evalue 7.50e-200
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 393.0
  • Bit_score: 633
  • Evalue 6.20e-179
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1179
ATGCCGTCTGATCCGCCTGTCCAGGTTTCACAGCGCAAGCTGCGCTTCGCCGGAATCATCGCCGGCGTTGTGATCGTAGGGATCGTTGTCACGGGAATCGTGTTGCGCGAGAATGGCAATGCGCGGTTGCGCGAGTGGACCGATGCGCAGGCGATCCCGACGGTTGCCGTTTCCAGACCCAGCGTCAAGGCGCCGAGTGCAAAGCTGACTTTGCCGGGCCGGCTCGAAGCCTATTATCGCGCGCCGATCTATGCGCGCGTCAGCGGATATCTGAAGAACTGGTATGTCGATATCGGCGCGCAGGTGAAAGCAGGGCAACTGCTTGCCGAGATCGACGCGCCGGACCTTGACCAGCAATTGCTGCAGGCCCGCGCCGACCTTGCCAATGCGGAGGCGGCCTCGAAGCTGTCTGCCGCGACGCTGAAACGCCGCCAGTCACTGCTCGCCTCCAACTTCGTATCGCTTCAGGAGATCGACGAGCGGACCGCAGATCTGTCGAGCAAGAATGCGCAGGTCAAGGCGATGCAAGCCAACGTAGATCGCTTGCAGGCACTGACGGGATACAAGCGCGTCGAAGCGCCGTTCGACGGCGTGGTGACCGAGCGTAACACCGACGTCGGCGCCTTGATCAATGGCGGCACCGGCACAGGGGCGGCCATGTTTGTCGTCTCCGACATCAAGAAGCTGCGTGTCTACGTCAACGTGCCGCAAAGCTATCTGTCGTCCATCAAGGTTGGCGGCACGGCGTCGATTGTTGTGCCGGAATATGTCGGGCGCTCATTCCCGGCGGTTGTCGATTCTTCCTCGCAGGCAGTCGATGTAGGCTCCGGCACCTCACGGATGCAATTGACGCTTGATAATGCCAGCGAAGAATTGCGGCCCGGCTCCTATGCCGATGTCACGCTTCACCTGACGAACGAGAACAATCTACTGACGATTCCGTCCAGCGCCCTTATTTTCAACCGGGATGGCTTGAGCGTGGCCACAGTCGATGATGATGATCGGCTCCGTTTCAAGAAAGTGACAATAGCTCGCGATCTGGGTCGTGAGATCGAGATCGCGACCGGACTGGCAGCGCAGGATCGTATCGTGGTGACGCCCGCCGATGGCGTGGTGGATGGCGATCGCGTCCGGATCGCCGGCAAGCAGAGCAGCGAAAAGACTTCCAGCGCCCGATAA
PROTEIN sequence
Length: 393
MPSDPPVQVSQRKLRFAGIIAGVVIVGIVVTGIVLRENGNARLREWTDAQAIPTVAVSRPSVKAPSAKLTLPGRLEAYYRAPIYARVSGYLKNWYVDIGAQVKAGQLLAEIDAPDLDQQLLQARADLANAEAASKLSAATLKRRQSLLASNFVSLQEIDERTADLSSKNAQVKAMQANVDRLQALTGYKRVEAPFDGVVTERNTDVGALINGGTGTGAAMFVVSDIKKLRVYVNVPQSYLSSIKVGGTASIVVPEYVGRSFPAVVDSSSQAVDVGSGTSRMQLTLDNASEELRPGSYADVTLHLTNENNLLTIPSSALIFNRDGLSVATVDDDDRLRFKKVTIARDLGREIEIATGLAAQDRIVVTPADGVVDGDRVRIAGKQSSEKTSSAR*