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SCNpilot_solid_2_scaffold_28_101

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 115712..118165

Top 3 Functional Annotations

Value Algorithm Source
Organic solvent tolerance protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V602_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 818.0
  • Bit_score: 1534
  • Evalue 0.0
  • rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 818.0
  • Bit_score: 1534
  • Evalue 0.0
organic solvent tolerance protein; K04744 LPS-assembly protein similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 817.0
  • Bit_score: 1450
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2454
ATGAGGCTGCGCCGCTATCGCCTCGGCATGTCCGTTGTCCTGATGCTCGGTGCCGGTGTGTTGGCCCTACCCGACTCCGCCCCCGCAGCCACCAACAATTTCGTCTACAACAGGCGTCCGCCGGTGCCGAAACCGGCGAAGGACAAGAACGCCAATAACGGGCAGATGCTCGTGAAGGCGCTGGAGATCAATTACGACTACAACAACAATCGCGTCGCCGCGGTCGGCAACGTGCAGATCTACTACAACGGCTCGACGCTCGAGGCCGACAAGGTCATCTACGACCAGAAAACCAAGCGGCTTCACGCCGAGGGCAACGTCCGCCTCGCCGAGGCCGACGGCAAGGTGGTGAACGCCAACCTGCTCGACCTTTCCGACGACTATCGCGACGGCTTTGTCGATTCACTGCGCCTCAACACGCCGGATGAGACGCGGATGTCGGCGGCGCGCGCCGATCGCAGCAATGGCGACATCACCATTTTCCAGAGCGGCACCTATACCGCCTGCGCGGCCTGCCGCGAGCATCCCGAGCGTCCGCCGCTGTGGCAGGTGAAGGCCGCGCGCATCATCCACAACAAGACCGAGCAGATGCTCTACTTCGAAGACGCGAAAGTGGAGTTCTTCGGTCATCCGCTCGCCTACCTGCCGTATTTCTCGACGCCCGATCCGACCGTGAAGCGCAAGACCGGCTTCCTGATGCCGTGGGCGGGCTATAACTCATTCACCGGCTACAGCGCCGAGATCCCTTTCTACTGGGCGATCGCGCCAAATTACGACATGACCCTCACGCCGCGCATCACCTCGCGGCAGGGCGTGCTCGGCCAGATCGACTTTCGTCAGCGCCTGATCAACGGCTCCTATGAAATCCGCGGCTACGGCATCCATCAGGAAGATCCCGGCGCCTATGCCGGGCAGGTCGGCGACCGCAACTGGCGCGGCGGCCTCGATTCGAACGGCCAGTTCGCGCTGAATGACAAATGGGTCGCGGGCTGGACCGCCGTGCTTGCGACCGACAACCGCTTCTTCAGCGACTACAAGCTCGGCCCCTACAGAAACCCGCTGGGCTCGTTCCTGCTGACGCCAACCGAAGGCATCTCGCAGGTCTACCTCACCGGCGTCGGCAATCGCAGCTATTTCGACATCCGCTCGCTCTACTACTACGGCTTCAACGCCGCCGACGTGCAGAAGCAGATCCCGATCGTCGCACCGGTGATCGACTACAACAACGTGCTGAACCAGAACGTGCTGGGCGGCGAGTTCAGCTACAAGGGCAACTTCGTCAATCTGACGCGCAGTCAGGCAAACTTCGATGCCATTTCTTCGGCCGCGCAGACGCAGATGCGAAATAATTGGACGCCAAATCCGACAGCCTGCATAACGAGTCCAGATCCGCTTGCTCGAACCAATTGCGTCCTTCGCGGTGTGCCCGGTGATTACACCCGTCTTTCAGGCGAAGCCCAGTGGCGGCGGTCGTTCACCGATCCGTGGGGCCAGATCTTCACGCCGTTCGCCTCGCTGCGCGGTGACCTGATCAACGCCAGCATCACCGATCAGCCGGGCGTCTCCAACTTCATCGCGCCAGGCACCTATCAGGAAGCCCGCCTGATGCCGGCGGTCGGCCTCGAATATCGCTATCCGTTCATCAACGTCCAGCCGTGGGGCACCACGACGGTCGAGCCGATCGCGCAGGTCATCCTGCGCCCGAACGAGCAGAAGGCCGGACAGTTGCCGAACGAAGACGCCCAGAGCCTGAGCTTCGACGACACCAATCTGTTCAGCGTCAACAAGTTCTCGGGCTGGGATCGCGTTGAAGGCGGCGGCCGCGCCAATGTCGGCGTGCAGGCAACGACGCAGTTCGACCGCGGCGGCACCATCAACATGCTGTTCGGCCAGTCCTACCAGCTTTACGGATTGAACTCGTATGCGGTGCAGAGCCTGACCAACACCGGTATCGATTCCGGCCTCGACAAGTCCACTTCGGATTACGTCGGCCGCCTCGCCTACGCGCCCAACAAGATCTTCAGCCTGACGACGCGCTTCCGGCTCGACGAAGCAACGATGGATGTGAAGCGCTTCGAGGCGGAAGGCAGAGCCAATTTCGACCGCTGGTCGATGAGCCTTCTGTACGGCAAGTACGCGCCACAGCCTGAACTCGGCTATCTGACCGAGCGTCAAGGCCTGCTCGGCACCGGTTCGTTCAAGATCGCCACCAACTGGCAGGTCTCAGGCGGCTTGCGCTACGACATCGCCAACGACAAGGTGAACCAGTACATCGTCGGTGCAGGATATGTGGACGATTGCTTCCTGCTCGCCGTCAACTACGTGACTGACTACAACTACACCACGATCGGCAGCGTCGCGCCTGTCACCGATCACCGTGTCATGTTCCAGCTCGGCTTGCGTACCATCGGCGGAACCTCGATTTCGCAAAACGTCTCTTCATCCACCCCGTGA
PROTEIN sequence
Length: 818
MRLRRYRLGMSVVLMLGAGVLALPDSAPAATNNFVYNRRPPVPKPAKDKNANNGQMLVKALEINYDYNNNRVAAVGNVQIYYNGSTLEADKVIYDQKTKRLHAEGNVRLAEADGKVVNANLLDLSDDYRDGFVDSLRLNTPDETRMSAARADRSNGDITIFQSGTYTACAACREHPERPPLWQVKAARIIHNKTEQMLYFEDAKVEFFGHPLAYLPYFSTPDPTVKRKTGFLMPWAGYNSFTGYSAEIPFYWAIAPNYDMTLTPRITSRQGVLGQIDFRQRLINGSYEIRGYGIHQEDPGAYAGQVGDRNWRGGLDSNGQFALNDKWVAGWTAVLATDNRFFSDYKLGPYRNPLGSFLLTPTEGISQVYLTGVGNRSYFDIRSLYYYGFNAADVQKQIPIVAPVIDYNNVLNQNVLGGEFSYKGNFVNLTRSQANFDAISSAAQTQMRNNWTPNPTACITSPDPLARTNCVLRGVPGDYTRLSGEAQWRRSFTDPWGQIFTPFASLRGDLINASITDQPGVSNFIAPGTYQEARLMPAVGLEYRYPFINVQPWGTTTVEPIAQVILRPNEQKAGQLPNEDAQSLSFDDTNLFSVNKFSGWDRVEGGGRANVGVQATTQFDRGGTINMLFGQSYQLYGLNSYAVQSLTNTGIDSGLDKSTSDYVGRLAYAPNKIFSLTTRFRLDEATMDVKRFEAEGRANFDRWSMSLLYGKYAPQPELGYLTERQGLLGTGSFKIATNWQVSGGLRYDIANDKVNQYIVGAGYVDDCFLLAVNYVTDYNYTTIGSVAPVTDHRVMFQLGLRTIGGTSISQNVSSSTP*