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SCNpilot_solid_2_scaffold_28_116

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 131883..132338

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND34_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 151.0
  • Bit_score: 299
  • Evalue 2.00e-78
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 536 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 151.0
  • Bit_score: 299
  • Evalue 2.80e-78
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 151.0
  • Bit_score: 258
  • Evalue 1.60e-66

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGCCTCTTTACGAGCATGTTTTCCTCGCGCGCCAGGACGCGAGTGCCCAACAGGTCGAAGAATTCACCACCCAGATCACCGGCGTGATCGAAGGTCTCGGCGGCAAGGTCGCCAAGACCGAGAACTGGGGCGTGCGTTCGCTCACCTATCGCATGAACAAGAACCGCAAGGCTCACTTCGTGCTTCTCAACATCGATGGCCCGGCTGCGATCGTTTCCGAGATCGAGCGTCAGGAGCGCATTAACGAAGACATCATTCGTTATCTGACCGTGCGTGTCGACGAACTCGAAGAAGGTCCGTCCGCCATGATGCGCAAGGCCGACCGGGATCGCGAACGTGACGACCGCGGCGGCGGCTTCGGTGGCCGTGGCGGCGACCGCGATGGCGGCTTCCGCTCCGAGCGTGGCCCTCGCCGGCCGCGTGACGAAGACGCAACCGCATCGGTAGAGGAGTAA
PROTEIN sequence
Length: 152
MPLYEHVFLARQDASAQQVEEFTTQITGVIEGLGGKVAKTENWGVRSLTYRMNKNRKAHFVLLNIDGPAAIVSEIERQERINEDIIRYLTVRVDELEEGPSAMMRKADRDRERDDRGGGFGGRGGDRDGGFRSERGPRRPRDEDATASVEE*