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SCNpilot_solid_2_scaffold_28_208

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(231651..232739)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein, family 7 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5N8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 362.0
  • Bit_score: 709
  • Evalue 1.50e-201
  • rbh
TRAP transporter solute receptor, DctP family {ECO:0000313|EMBL:CEG08392.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 362.0
  • Bit_score: 710
  • Evalue 9.70e-202
TRAP transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 359.0
  • Bit_score: 652
  • Evalue 7.00e-185
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAAGCGTCGCGATTTTCTGAAAGTGTCGGCAGCCAGTGCCGCCGCCGCATCCATTGCCGCGCCAGCCATCGCCCAGCCGATGCCTGTCATCAAGTGGCGGATGACGTCGAGTTTTCCGAAGTCTCTCGACACGCTCTACGGCGCCGGTGTGTTGATGGCGAAGCAAGTCGCCGAAATGACCGACAACAAGTTTCAGATCGAGGTCTTTGCGGCAGGTGAAGTCGTGCCGGGGTTGCAGGCGTTCGATGCTGCAGCGAATGGCACCGTCGAGATGGGGCATAGCGTCGCTTACTACTATGTCGGCAAGGATCCCACCTTCGCGGTCTATTCCTGCGTGCCGTTCGGGCTGAACGCGCGGATGCAGAATTCCTGGTGGTATCAGGGCGGCGGCGAGCAGCTCGGTAATGAGTTTTTCAAGAAGTATGGCGTGATCGCGCATCCGTGCGGCAACACCAACACCCAGATGGGTGGCTGGTTTCGCAAGGAGATCAAGACGCTTGCCGACCTTCGCGGCCTGAAAATGCGCATTGGCGGCATCGCAGGGCAGGTCATGGCAAAGCTCGGCGTCGTGCCGCAACAGCTTGCCGGCAGCGACATCTATCCGGCGCTGGAAAAAGGTACCATCGATGCAGCCGAGTGGGTCGGGCCTTATGACGACGAGAAGCTTGGATTCCAGAGGGTGGCGCCGTTTTATTGTTATCCAGGCTTCTGGGAAGGCGGGCCGATGATCCATGTCTTCACCAATCTGGCGAAGTGGAATTCGCTGCCGGAGACCTATCAGGCGATCGTCGCGAATGCGGCGGCGAACGCCAACATTTATATGGCGGCACGCTACGACGAGCAGAATCCCGCGGCTCTGAAACGCCTGGTGGCAAATGGCACGATGCTGCGCCCCTTCAGTCAGGACATCCTGCAGGAGGCCTTCAAGGCGACAAATGAACTGTGGGCGGAAATTTCCGCCAAGAATCCGGACTTCAAGAAATCGATCGAGGCGATGCAGGCCTATCGCAACGACCAGTATTTGTGGTGGCAGGTCGCCGAACTGACGTTCGACAATTTCCAGATCCGCTCCCGCAGCCACAGCTGA
PROTEIN sequence
Length: 363
MKRRDFLKVSAASAAAASIAAPAIAQPMPVIKWRMTSSFPKSLDTLYGAGVLMAKQVAEMTDNKFQIEVFAAGEVVPGLQAFDAAANGTVEMGHSVAYYYVGKDPTFAVYSCVPFGLNARMQNSWWYQGGGEQLGNEFFKKYGVIAHPCGNTNTQMGGWFRKEIKTLADLRGLKMRIGGIAGQVMAKLGVVPQQLAGSDIYPALEKGTIDAAEWVGPYDDEKLGFQRVAPFYCYPGFWEGGPMIHVFTNLAKWNSLPETYQAIVANAAANANIYMAARYDEQNPAALKRLVANGTMLRPFSQDILQEAFKATNELWAEISAKNPDFKKSIEAMQAYRNDQYLWWQVAELTFDNFQIRSRSHS*