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SCNpilot_solid_2_scaffold_112_20

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 18494..19168

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7C3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 224.0
  • Bit_score: 409
  • Evalue 2.00e-111
  • rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI51133.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 224.0
  • Bit_score: 408
  • Evalue 6.40e-111
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 224.0
  • Bit_score: 396
  • Evalue 5.60e-108
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
TTGGTTTATCGCCGTACACACCAAGTTGTAAAACGTTTGGAGGCGCGCCGCGCCGCCATCCTTGCGGCAGCCCGCGAAACGGCGTCGGAAGGGGGCATGGTGGCGGTCCAGATTGCTCCGGTAGCTGCACGCGCCAATGTCGCAGCGGGCACGGTCTATCGCTACTTTCCGTCCAAGGCTGATCTGATTTCGGAACTGATCGCGGACGTTTCCGACAGGGAGTTGATCGCAATCCGCCGCGCCGCCGATGCCGCCCCGGGGCCGTCTTCTGCGCTCGCTGCCGCCATCACTACCATCGCCGTTCATGTGGTATCTCATCGCAAGCTTGCCTGGGGTATTCTGGCGGAACCGGTGGATGTCGATGTCAGTGCTTCGCGCCTGACCAGCCGCCGCGCTATCGCTGCCGAACTCGAGCAACGCCTCGAAGCCACGATCAAGGCGGGCCATCTGCCCGCACAGGACACGGCGCTGACCGCGACCGCGCTGATTGGCGCGCTGCACGAGGCGCTGGTGGGGCCGTTGGCGATGGACGCAACGGGCGATCCGGCCAAATTACGGGAAGCGGTGCAAAATATCTCGCTGTTTGCGCTCCGTGCGGCCGGCGTGCTCGATGCCCGCGCCCGCGGCCTTGTTGTTCAGGCAGTGCTCCCGATCCGGATGGCGGTTGGCGGCTGA
PROTEIN sequence
Length: 225
LVYRRTHQVVKRLEARRAAILAAARETASEGGMVAVQIAPVAARANVAAGTVYRYFPSKADLISELIADVSDRELIAIRRAADAAPGPSSALAAAITTIAVHVVSHRKLAWGILAEPVDVDVSASRLTSRRAIAAELEQRLEATIKAGHLPAQDTALTATALIGALHEALVGPLAMDATGDPAKLREAVQNISLFALRAAGVLDARARGLVVQAVLPIRMAVGG*