ggKbase home page

SCNpilot_solid_2_scaffold_112_70

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(74194..75612)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate phosphodiesterase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7H3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 479.0
  • Bit_score: 797
  • Evalue 5.60e-228
  • rbh
Putative membrane protein YjcC {ECO:0000313|EMBL:CEG09330.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 479.0
  • Bit_score: 797
  • Evalue 7.90e-228
EAL domain-containing protein; K13593 cyclic-di-GMP phosphodiesterase, flagellum assembly factor TipF similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 485.0
  • Bit_score: 663
  • Evalue 4.00e-188
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGGTCCGCGTATCGACGATTTTCATCGCCATCTGCATGGTGCTGATCGCGGCTTCGTTCGGCCTCATTCTGTACGCGATGACCGGCCTGAGTATGCGCGAATCCGCCCTCGTCGCGCTGTCAACCCTCGTTTGCCTCGTCCTCTACAACGCCGTCTCGATGCGCATCCGCGGGCACTCTGATGCCAGCAGCCAGATCGCCGACTTGTCGCGCGGCACCGCCGATCTCGCCCGGCAGGTCGCCGAGTACGGCCGCCGCATGGCGCTGATCGAAACCAGGCTCGCCAGCGCCGACAAGGTCGCGCAGGACCGCGCCCGCTCCGTGATGAGCGAGATCGGCGAACTCGGCATCATGATCAAGCATCTCGCCGGGTCGGTCGCGACCCACGACGAACTGCTGACCTCGGCCACGAGCCTCGCCGCTGCGCATCGTCCTTTGCAGCCGCAGATGACGGACGCGGCTCAGGTCGAGCCGGCCCGCACGGCCGAGCAGCCCGCTCCGGCGCCCGTCGCGTTGCAGGCCGCCGCTGAAGCGATCTCGGATCTTCCGGACATGCTCGCCGCCATCAAGAATGCGGCAGAAGCCAATCGCATCGATCTCTATCTGCAGCCGATCGTGTCATTGCCTCAACGCAAGGTGCGCTTCTACGAAGCCGTTTCGCGTTTGCGCGACGAGAAGGACCACGTGTTCACCGCGGGCCAGTTCATCGACCTTGCCGAAGCAAGCGGCGTGATCGGCCAGATCGACTATACCGTGCTGTTCCGCTGCGTTCAGGTACTGCGCCGCCTGCAGGTGCGGACCAAGGACGTCGGCTTGTTCTGCAATATCTCTGGAATCACGCTTGCGAGCCGCGACATCTTTAGCGAATGCGTTGCCTTTCTCGAAGCTAACCGTGCGCTTGCACCCTCACTGGTACTGGAGTTCAAGCAGAGCGCGTTCTGCGGCCTCGGTCCCGTCGAGATCGAACATCTTACCGCGCTGAAACGGCTCGGCTTCCAGTTCTCCATCGACAATATCACCGACCTCAGGATCGACGGTCGCGAACTGGCCGACCGCGGCGTGCGCTACATTAAGGTGCCGACCCCGCTCCTGCTTGACCAGAAGGAAGCCACATCGTCCGACATCCACACCGCCGATCTGGCCAGCCTGCTGACACGGTTCGGCATCGACCTGATCGCAGAGAGGATCGAAGGCGAGCGCTCCGTCGCGGACCTGCTCGATTACGACGTGCGCTTCGGTCAGGGCTTTCTGTTCTCCGCGCCGCGGCCGCTGCGTCCCGAAGCCGCAGTGCCGACTCTGGTTGCCGCGAGCCGCCAATCTGAGGCGCCCACCGAGCCTACCGCGATCGCCATCCACGCAGCCGCCGAGACACGCCTGTCGGGTACTGCCGCCCTCGCCCGGCGGATCGCGCAAAGCTAG
PROTEIN sequence
Length: 473
MVRVSTIFIAICMVLIAASFGLILYAMTGLSMRESALVALSTLVCLVLYNAVSMRIRGHSDASSQIADLSRGTADLARQVAEYGRRMALIETRLASADKVAQDRARSVMSEIGELGIMIKHLAGSVATHDELLTSATSLAAAHRPLQPQMTDAAQVEPARTAEQPAPAPVALQAAAEAISDLPDMLAAIKNAAEANRIDLYLQPIVSLPQRKVRFYEAVSRLRDEKDHVFTAGQFIDLAEASGVIGQIDYTVLFRCVQVLRRLQVRTKDVGLFCNISGITLASRDIFSECVAFLEANRALAPSLVLEFKQSAFCGLGPVEIEHLTALKRLGFQFSIDNITDLRIDGRELADRGVRYIKVPTPLLLDQKEATSSDIHTADLASLLTRFGIDLIAERIEGERSVADLLDYDVRFGQGFLFSAPRPLRPEAAVPTLVAASRQSEAPTEPTAIAIHAAAETRLSGTAALARRIAQS*