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SCNpilot_solid_2_scaffold_92_93

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 79342..79959

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V276_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 205.0
  • Bit_score: 411
  • Evalue 3.80e-112
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 205.0
  • Bit_score: 411
  • Evalue 5.30e-112
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 96.1
  • Coverage: 205.0
  • Bit_score: 404
  • Evalue 2.50e-110
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGACTAAGCGCAGTGAGGCGAAGTATAAAATCGATCGCCGTATGGGTCAGAACATCTGGGGCCGCCCGAAGAGCCCCGTCAACAAGCGCGAATATGGCCCCGGCCAGCACGGCCAGCGTCGCAAGGGCAAGCTCTCCGACTTCGGCACGCAGCTCCGCGCCAAGCAGAAGCTCAAGGGCTACTACGCCAACATTTCCGAACGTCAGTTCTACGCCGTGTATGTCGAGGCAACCCGCCTCAAGGGCGATTCAGGCGAGAACCTGATCGGCCTGCTCGAGCGCCGCCTCGACGCCATCGTCTACCGCGCCAAGTTCGTGCCGACGATGTTCGCCGCGCGCCAGTTCATCAACCACGGCCACATCAAGGTGAACGGCAAGCGCGTCAACATTCCGAGCTACAAGGTCAAGGTCGGCGACGTGATCGAGATCAAGGAAGCTTCCAAGCAGCTCGCCACCGTGCTGGAAGCCAACCAGCTCGCCGAGCGCGACGTGCCGGATTTCATCGAAGTCGATCACGGCAAGCAGACCGCGAAGTTCACGCGCGTTCCAAACCTGTCGGAAGTTCCCTTCCCGGTTCAGATGGAGCCACATCTCATCATCGAATTCTATTCGCGCTAA
PROTEIN sequence
Length: 206
MTKRSEAKYKIDRRMGQNIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGTQLRAKQKLKGYYANISERQFYAVYVEATRLKGDSGENLIGLLERRLDAIVYRAKFVPTMFAARQFINHGHIKVNGKRVNIPSYKVKVGDVIEIKEASKQLATVLEANQLAERDVPDFIEVDHGKQTAKFTRVPNLSEVPFPVQMEPHLIIEFYSR*