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SCNpilot_solid_2_scaffold_92

Search features with annotation key words

Displaying items 91-120 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_92_89
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75596..76903
DNA (1308bp) protein (436aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase PurB (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V271_9BRAD rbh
SCNpilot_solid_2_scaffold_92_90
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76916..77473
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NF98_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS27631.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein; K07002 rbh
SCNpilot_solid_2_scaffold_92_91
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77485..78036)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ79_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS27630.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cytochrome b561 rbh
SCNpilot_solid_2_scaffold_92_92
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78230..79027
DNA (798bp) protein (266aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=666684 species="Bacteria; Prote
murI; glutamate racemase (EC:5.1.1.3); K01776 glutamate racemase [EC:5.1.1.3] rbh
Glutamate racemase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V274_9BRAD rbh
SCNpilot_solid_2_scaffold_92_93
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


79342..79959
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V276_9BRAD rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 rbh
SCNpilot_solid_2_scaffold_92_94
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80053..80391)
DNA (339bp) protein (113aa)
Glutaredoxin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V277_9BRAD
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bac
monothiol glutaredoxin, Grx4 family; K07390 monothiol glutaredoxin
SCNpilot_solid_2_scaffold_92_95
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80815..81903
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V278_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52058.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_92_96
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81948..82916
DNA (969bp) protein (323aa)
Methyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V279_9BRAD rbh
Methyltransferase {ECO:0000313|EMBL:EFI52059.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein rbh
SCNpilot_solid_2_scaffold_92_97
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82913..84094)
DNA (1182bp) protein (394aa)
Low temperature requirement A n=1 Tax=Afipia sp. 1NLS2 RepID=D6V280_9BRAD rbh
Putative membrane protein {ECO:0000313|EMBL:CEG07485.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
low temperature requirement A rbh
SCNpilot_solid_2_scaffold_92_98
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84116..84349)
DNA (234bp) protein (78aa)
BolA family protein n=2 Tax=Afipia RepID=D6V281_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS27622.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
BolA-like protein
SCNpilot_solid_2_scaffold_92_99
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84832..85962
DNA (1131bp) protein (377aa)
Acyltransferase 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V283_9BRAD rbh
Glucans biosynthesis protein {ECO:0000313|EMBL:CEG07482.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
hypothetical protein rbh
SCNpilot_solid_2_scaffold_92_100
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86146..87309
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGP9_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE99646.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
SCNpilot_solid_2_scaffold_92_101
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87313..89532)
DNA (2220bp) protein (740aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V284_9BRAD rbh
SCNpilot_solid_2_scaffold_92_102
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89529..90230)
DNA (702bp) protein (234aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
purQ; phosphoribosylformylglycinamidine synthase 1 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] rbh
Phosphoribosylformylglycinamidine synthase 1 n=2 Tax=Oligotropha carboxidovorans RepID=B6JBP2_OLICO rbh
SCNpilot_solid_2_scaffold_92_103
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90572..91318)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037543FC
Uncharacterized protein {ECO:0000313|EMBL:GAO38992.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
SCNpilot_solid_2_scaffold_92_104
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91340..91582)
DNA (243bp) protein (81aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formyl
purS; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
Phosphoribosylformylglycinamidine synthase, purS protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ66_AFIFE
SCNpilot_solid_2_scaffold_92_105
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91695..92492)
DNA (798bp) protein (266aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V287_9BRAD rbh
SCNpilot_solid_2_scaffold_92_106
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92756..93073
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V288_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52068.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_92_107
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93207..93983
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BKC4_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07235.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_92_108
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94017..95216)
DNA (1200bp) protein (400aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
RNA methyl transferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] rbh
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V290_9BRAD rbh
SCNpilot_solid_2_scaffold_92_109
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95697..96914
DNA (1218bp) protein (406aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhiz
icd; isocitrate dehydrogenase [NADP] (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] rbh
Isocitrate dehydrogenase [NADP] n=1 Tax=Afipia sp. 1NLS2 RepID=D6V291_9BRAD rbh
SCNpilot_solid_2_scaffold_92_110
unknown

Not on your lists

comp(97148..97243)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_92_111
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97271..97648
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V292_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52072.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_92_112
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97611..99302)
DNA (1692bp) protein (564aa)
Sodium/hydrogen exchanger n=1 Tax=Afipia sp. 1NLS2 RepID=D6V293_9BRAD rbh
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EFI52073.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative cation:proton antiport protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family rbh
SCNpilot_solid_2_scaffold_92_113
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99499..100332
DNA (834bp) protein (278aa)
UspA domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V294_9BRAD rbh
Universal stress protein family protein {ECO:0000313|EMBL:CEG07471.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis
hypothetical protein rbh
SCNpilot_solid_2_scaffold_92_114
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(100497..103163)
DNA (2667bp) protein (889aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V296_9BRAD rbh
SCNpilot_solid_2_scaffold_92_115
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103595..104746
DNA (1152bp) protein (384aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
gcvT; aminomethyltransferase GcvT (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] rbh
Aminomethyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V297_9BRAD rbh
SCNpilot_solid_2_scaffold_92_116
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104755..105120
DNA (366bp) protein (122aa)
Glycine cleavage system H protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V298_9BRAD
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1
gcvH; glycine cleavage system H protein GcvH; K02437 glycine cleavage system H protein
SCNpilot_solid_2_scaffold_92_117
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105188..108040
DNA (2853bp) protein (951aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] rbh
Glycine dehydrogenase (decarboxylating) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V299_9BRAD rbh
SCNpilot_solid_2_scaffold_92_118
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(108240..109325)
DNA (1086bp) protein (362aa)
Protein RecA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2A0_9BRAD rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1035 species="Bacteria; Proteobacte
recA; recombinase A; K03553 recombination protein RecA rbh
Displaying items 91-120 of 191 in total

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