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SCNpilot_solid_2_scaffold_92_108

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(94017..95216)

Top 3 Functional Annotations

Value Algorithm Source
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256 similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 392.0
  • Bit_score: 661
  • Evalue 9.70e-187
RNA methyl transferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 386.0
  • Bit_score: 656
  • Evalue 4.10e-186
  • rbh
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V290_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 392.0
  • Bit_score: 660
  • Evalue 1.20e-186
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGTCGGGCACCGACAAGACCAAGCCGCGCACCGGTCTGCCGGGCCCCGTGGTGGTGCTGGTGGAGCCGCAGCTTGGCGAGAACATCGGCATGGCCGCGCGCGCCATGGGTAATTTCGGCCTGACACGTTTACGTTTGGTGAAGCCGCGCGACGGCTGGCCGAACATGGCGGCGCAGCGGGCGGCGGCGGGTGCCGATCACATTCTGGAGCAGGTCGAGCTATTCGACACGGTCGAGGTGGCGGTGGCCGACTGCACGCTGCTGTTCGCGACGACCGCCCGGGCGCACGACCAGGCCAAGCCCGTGGTCGCGCCGGAGGGTGCTGCCCGCGAGATCATGGAGGAAGTGGCGCGCGGGGCCACCGCCGGCATTTTGTTCGGGCGGGAGCGTTCGGGCCTGACCAACGAGGAGGTCGCGCTCGCCAACCGGATCGTGACCTTCCCGGTCGATCCGGGATTTGCCTCGCTCAATCTCGCCCAGGCGGTGCTGCTGATGGGCTACGAGTGGTTCAAGCTTGCATCCGGTGGCCAGATACCATTCTCGATGCCTGAGCGGTCCGAACGAGCCTCCAGCCATCAAATGCAGGCGTTTTTTGACAATCTGGTCGGGGAACTCGACAAGGTCGAATTCCTCCGCCCGGCCGAGAAACGCGACGTCATGCTGGTCAATTTACGTAATATTTTCAGCCGGATGGAGCCGACCAGGCAGGACATGCACACCCTCCACGGGGTGATTATGGCGATTGCCGAGGGCCGCAAGGGCCCCGCCAAGGGCGGCGTGCTGGATGGAACCCAAGCCACGCGGCTGCGGGCGCTGCTGGCGGAACAAGGTTCCCCCGGCAGCAACGGTTCTAGTTCCGTACGAGGGCTGGCGCGGCTTCTGCGGCGAAATCCGACCGATGCTGAGCGTATTTTGTGGCAGGTACTGACCAGCGACCGCCGCTTTGCCGGGCAGTTCAAACGGCAGACGCCGGTCGGCCGCCATATTCCCGATTTCGTCTCGTTCGTGCACCGTATCGCGGTCGAGATTATCCAGCCCGGTGAGAGTGATGTGATCGTGCGGGATCGCGCCGCGCGGACCGAATGGCTTAAGGCGCGGGACTATCGTGTTGTCGCAGTCAGGGCCGCAGCGGTTGAAACCGATCTGGCGCGCGTGCTCGATGATCTGGCGGCGCGGATGGCGGCGGAGACGAAGCGCTAG
PROTEIN sequence
Length: 400
MSGTDKTKPRTGLPGPVVVLVEPQLGENIGMAARAMGNFGLTRLRLVKPRDGWPNMAAQRAAAGADHILEQVELFDTVEVAVADCTLLFATTARAHDQAKPVVAPEGAAREIMEEVARGATAGILFGRERSGLTNEEVALANRIVTFPVDPGFASLNLAQAVLLMGYEWFKLASGGQIPFSMPERSERASSHQMQAFFDNLVGELDKVEFLRPAEKRDVMLVNLRNIFSRMEPTRQDMHTLHGVIMAIAEGRKGPAKGGVLDGTQATRLRALLAEQGSPGSNGSSSVRGLARLLRRNPTDAERILWQVLTSDRRFAGQFKRQTPVGRHIPDFVSFVHRIAVEIIQPGESDVIVRDRAARTEWLKARDYRVVAVRAAAVETDLARVLDDLAARMAAETKR*