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SCNpilot_solid_2_scaffold_137_60

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 61764..64235

Top 3 Functional Annotations

Value Algorithm Source
hrpB; ATP-dependent RNA helicase HrpB (EC:3.6.1.-); K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 838.0
  • Bit_score: 1354
  • Evalue 0.0
  • rbh
ATP-dependent helicase HrpB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4S4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 824.0
  • Bit_score: 1450
  • Evalue 0.0
  • rbh
ATP-dependent helicase HrpB {ECO:0000313|EMBL:EFI52954.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 824.0
  • Bit_score: 1450
  • Evalue 0.0

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2472
ATGATTTTCAATACCCCTCTCCCCATCGATGCCGTCCTCGGCGATCTCGCGGCAACGCTCGGGCGGACCAACACCGCCGTGCTGGTCGCGCCGCCAGGCGCCGGCAAGACCACGCGGGTGCCGCTGGCGCTGTGTGATGCGCGGTGGGCCGGTGAGGGCAAGATCATCGTGCTGGAGCCGCGCCGCATTGCCGCGCGTGCCGCCGCCGAACGGATGGCGCAGACACTGGGCGAGAAAGTTGGCGAGAGCGTCGGCTACCGCGTTCGCTTCGGCTCCAAAGTCTCGCGCAAGACGCGGATCGAGGTTGTGACGGAAGGCATCTTCACCCGCCAGATTCTCGACGATCCTGAACTCAAGGGCATTGCCGCCGTGCTGTTCGACGAATTCCACGAACGCTCGCTCGATGCCGATCTCGGCCTTGCACTGGCGTGCGATGCGCAAAGCGGCTTGCGCAATGATTTGCGAATTCTTGTGATGTCGGCGACGCTCGATGGCGCGCGGGTTGCGAAACTTCTCGGCGACGCGCCGGTGGTGGAGAGCGAAGGCCGCGCTTACCCTGTTGAGACGCGCCATCGCGGTCGCAAGGCCGATGCGTCCATTGAGCGGCAGATGGCGGATGCGATTGCGTCCGCGTTGCGCACGGATGCCGGTTCGGTGCTGGCGTTCCTGCCGGGCGCAGCCGAAATTCGCCGCACGCAGAATTTTCTCACTGAGCGCGTCAGCGATCCGAACATTGAGATCGTGCCGCTGTATGGTGCGCTTGATGCGGCCGTGCAGGATCGCGCCATCGCCCCCGCACCAAAGGGCACGCGCAAGGTGGTGCTCGCGACCTCGATTGCGGAAACCTCGCTCACCATCGAGGGTGTGCGCATTGTGGTTGATTCCGGGCTCGCGCGCGTGCCGCGCTATGAGCCCGATATTGCCCTGACGCGGCTCGAGACCGTCCGTGCCTCGCGCGCCGCGGTCGACCAGCGCCGTGGGCGCGCGGGGCGCACCGAACCCGGCGTCTGCTATCGGCTGTGGGACGAGCCGCAGACGGCGTCGTTCGAAGCCTTCACGCGGCCTGAAATCCTGTCCGCCGACCTGTCCTCGCTGGTGCTTGATCTCGCGCATTGGGGTGTGACCGATCCGGCGACGCTGGCGTTTCTCGATCCTCCACCACAGCCTGCGTTGCTGGAGGCGCGCGTGTTGCTGCGTGAACTCGACGCGCTGGATGCGGACGGGCGCATCACGGCGGAGGGCAAGGCGCTGCGTACACTGGCGCTGCCGCCGCGGCTGGCGCGCATGATCGTCGATGCGAACAGGATGGGCGCCGGCGAGGATGCGGCACGGATCGCCGCGATCCTGACCGAGCGTGGGCTCGGCGGCGATGGCGTTGATCTCGATGCACGGCTGGAGAATTTTGCGCGCGACCGCTCGCCGCGCGCGCAAGGCGCCCGGCAACTGGTGCAGCGATGGATCGCACAGGTGAATGAAAGCTCCTCACGCACCGAGCGAGGTGAAGGGTTATCGACCGGTGCGATCCTCGCGCTGGCGTTTCCCGATCGCGTGGCGCGCAATCGCGGCAAGGCGAGTTTCACGCTGGCGAACGGGCGCGGCGCCAATGTCGATCCGGTTTCGGCGCTGGCAAGATCGCCTTATATCGCCGTCGCCGAACTGACGGGCACCGCCGCCAGCGGACGCATCCTGCTGGCGGCGCCAATCACGCAAGACGAGATCGAGGCGCGCTTTGCCGATCATATCGTGATCGAGGATGAAACGAGCTTTGATAAGCCCGCGATGGCGCTGCGCGCGCGGCGGCGCAAGCGGCTGCATGCCATCACGCTGTCGGAGCAGAATCTGCCGGTCGCCGCCTCTGAACAGACCGCGCAAATTCTTGCCGATGGACTCGCCGCGGCAGGTCTGGATCGCCTGCCATGGGCGAAGCCGCTGAAGCAATGGCGTGACCGGGTGATGTTCCTGCGCACCACGTCGCCGGACGAATGGCCCGATCTGTCCGATGCGGCTCTGGCCGCCAGCCGCGCGGAGTGGCTCGCGCCAGCGCTCATGGACAAGACTTCGCTCTCCGATATGTCCGCAAGCGATCTGTCCGATGCGGTGATGGCGCTGCTCCCCTGGGACAAGCGCGCCCGGCTGGAGCGCGAGGCGCCGACCCATTTCACCGCGCCGACCGGCACCGCACTGCCGATCGACTATGAGGCGGAGCAGGGGCCGACCATTGCCGTCCGCTTGCAGGAATTGTTCGGGTTGAACGTCCACCCTGCCATCGCGAATGGAAGGTTGCCGCTGGTGGTCGAGTTGCTGTCGCCGGCGCATCGGCCGGTGCAGGTCACGCGCGATCTGCCGGGTTTCTGGCGCGGCTCCTACGCGGCCGTGCGCTCCGACCTGCGCGGCCGTTATCCGCGTCATCCCTGGCCGGAAGACCCGGCCTCAGCGGAGCCGACACGCCGGGTGAAGCCGCGAGGAACCTGA
PROTEIN sequence
Length: 824
MIFNTPLPIDAVLGDLAATLGRTNTAVLVAPPGAGKTTRVPLALCDARWAGEGKIIVLEPRRIAARAAAERMAQTLGEKVGESVGYRVRFGSKVSRKTRIEVVTEGIFTRQILDDPELKGIAAVLFDEFHERSLDADLGLALACDAQSGLRNDLRILVMSATLDGARVAKLLGDAPVVESEGRAYPVETRHRGRKADASIERQMADAIASALRTDAGSVLAFLPGAAEIRRTQNFLTERVSDPNIEIVPLYGALDAAVQDRAIAPAPKGTRKVVLATSIAETSLTIEGVRIVVDSGLARVPRYEPDIALTRLETVRASRAAVDQRRGRAGRTEPGVCYRLWDEPQTASFEAFTRPEILSADLSSLVLDLAHWGVTDPATLAFLDPPPQPALLEARVLLRELDALDADGRITAEGKALRTLALPPRLARMIVDANRMGAGEDAARIAAILTERGLGGDGVDLDARLENFARDRSPRAQGARQLVQRWIAQVNESSSRTERGEGLSTGAILALAFPDRVARNRGKASFTLANGRGANVDPVSALARSPYIAVAELTGTAASGRILLAAPITQDEIEARFADHIVIEDETSFDKPAMALRARRRKRLHAITLSEQNLPVAASEQTAQILADGLAAAGLDRLPWAKPLKQWRDRVMFLRTTSPDEWPDLSDAALAASRAEWLAPALMDKTSLSDMSASDLSDAVMALLPWDKRARLEREAPTHFTAPTGTALPIDYEAEQGPTIAVRLQELFGLNVHPAIANGRLPLVVELLSPAHRPVQVTRDLPGFWRGSYAAVRSDLRGRYPRHPWPEDPASAEPTRRVKPRGT*