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SCNpilot_solid_2_scaffold_137

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Displaying items 1-30 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_137_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116..634
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9T6_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05224.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_137_2
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

631..1434
DNA (804bp) protein (268aa)
Conjugal transfer protein n=3 Tax=Oligotropha carboxidovorans RepID=B6J9T5_OLICO
traF2; putative conjugal transfer protein TraF
Putative conjugal transfer protein TraF {ECO:0000313|EMBL:AEI05225.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligo
SCNpilot_solid_2_scaffold_137_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1699..2349
DNA (651bp) protein (217aa)
Lytic transglycosylase, catalytic n=2 Tax=Oligotropha carboxidovorans RepID=B6J9T3_OLICO
putative transglycosylase
Putative transglycosylase {ECO:0000313|EMBL:AEI05227.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxi
SCNpilot_solid_2_scaffold_137_4
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2666
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDV3_ZYMMN
hypothetical protein
Uncharacterized protein; TaxID=622759 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain NCIB 11163).;"
SCNpilot_solid_2_scaffold_137_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2663..4720
DNA (2058bp) protein (686aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6J9T2_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05228.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_137_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4837..5175
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003805574
Acyltransferase 3 {ECO:0000313|EMBL:EIJ34388.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
acyltransferase
SCNpilot_solid_2_scaffold_137_7
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5176..5598
DNA (423bp) protein (141aa)
Acyltransferase 3 n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0AS84_MARMM
acyltransferase
Acyltransferase 3 {ECO:0000313|EMBL:ABI64853.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Maricaulis maris (strain M
SCNpilot_solid_2_scaffold_137_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6468..7751
DNA (1284bp) protein (428aa)
Metal ion efflux outer membrane factor protein family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9U3_PHEZH
metal ion efflux outer membrane factor protein family; K15725 cobalt-zinc-cadmium resistance protein CzcC
Metal ion efflux outer membrane factor protein family {ECO:0000313|EMBL:ACG77857.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobact
SCNpilot_solid_2_scaffold_137_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7754..9013
DNA (1260bp) protein (420aa)
Cation efflux system protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9U4_PHEZH
cation efflux system protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
Cation efflux system protein {ECO:0000313|EMBL:ACG77858.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
SCNpilot_solid_2_scaffold_137_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9021..12200
DNA (3180bp) protein (1060aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9U5_PHEZH
AcrB/AcrD/AcrF family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:ACG77859.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylo
SCNpilot_solid_2_scaffold_137_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12250..13587
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F4C738 rbh
Probable NreB protein {ECO:0000313|EMBL:EAQ36316.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A
major facilitator superfamily protein rbh
SCNpilot_solid_2_scaffold_137_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13705..14691
DNA (987bp) protein (329aa)
Transcriptional regulator, LysR family n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JJW7_OLICO
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05256.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
SCNpilot_solid_2_scaffold_137_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15074..17065
DNA (1992bp) protein (664aa)
Conjugal transfer protein TraG n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW6_OLICO
traG2; conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4
Conjugal transfer protein TraG {ECO:0000313|EMBL:AEI05257.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17076..17537
DNA (462bp) protein (154aa)
CopG-like protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW5_OLICO
CopG-like protein
CopG-like protein {ECO:0000313|EMBL:AEI05258.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans
SCNpilot_solid_2_scaffold_137_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18653
DNA (981bp) protein (327aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW4_OLICO rbh
trbB2; P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:AEI05259.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligo
SCNpilot_solid_2_scaffold_137_16
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18650..18982
DNA (333bp) protein (111aa)
Conjugal transfer protein TrbC n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP33_RHOPX
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KJV40249.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundi
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
SCNpilot_solid_2_scaffold_137_17
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18982..19263
DNA (282bp) protein (94aa)
Conjugal transfer protein TrbB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW2_OLICO
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3
Conjugal transfer protein TrbD {ECO:0000313|EMBL:GAJ29787.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas
SCNpilot_solid_2_scaffold_137_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19278..21728
DNA (2451bp) protein (817aa)
Conjugal transfer protein trbE n=2 Tax=Oligotropha carboxidovorans RepID=B6JJW1_OLICO rbh
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 rbh
Conjugal transfer protein trbE {ECO:0000313|EMBL:AEI05262.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21725..22489
DNA (765bp) protein (255aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Oligotropha carboxidovorans RepID=B6JJW0_OLICO
trbJ1; conjugal transfer protein TrbJ
P-type conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEI05263.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotr
SCNpilot_solid_2_scaffold_137_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22500..22790
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV9_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05264.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_137_21
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22790..24136
DNA (1347bp) protein (449aa)
Conjugal transfer protein TrbL n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV8_OLICO rbh
trbL2; conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:AEI05265.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24174..24731
DNA (558bp) protein (186aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV7_OLICO
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AEI05266.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_23
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24728..25723
DNA (996bp) protein (332aa)
Conjugal transfer protein TrbG n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV6_OLICO
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
Conjugal transfer protein TrbG {ECO:0000313|EMBL:AEI05267.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_24
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25699..26754
DNA (1056bp) protein (352aa)
Conjugal transfer protein TrbI n=2 Tax=Oligotropha carboxidovorans RepID=F8BJW8_OLICM
trbI2; conjugal transfer protein TrbI; K03195 type IV secretion system protein VirB10
Conjugal transfer protein TrbI {ECO:0000313|EMBL:AEI05268.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_25
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26757..26990
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV5_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05269.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_137_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27030..27287)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJV4_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05270.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
SCNpilot_solid_2_scaffold_137_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27330..28571)
DNA (1242bp) protein (414aa)
Integrase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9W4_9RHIZ
integrase
Integrase {ECO:0000313|EMBL:AGK59813.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NE
SCNpilot_solid_2_scaffold_137_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28703..29320)
DNA (618bp) protein (206aa)
DNA repair protein RadC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4V6_9BRAD rbh
DNA repair protein RadC {ECO:0000313|EMBL:EFI52986.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
radc; DNA repair protein Radc; K03630 DNA repair protein RadC rbh
SCNpilot_solid_2_scaffold_137_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29403..30230)
DNA (828bp) protein (276aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase Map (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
Methionine aminopeptidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4V5_9BRAD rbh
SCNpilot_solid_2_scaffold_137_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30328..31677)
DNA (1350bp) protein (450aa)
MscS Mechanosensitive ion channel n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4V4_9BRAD rbh
Potassium efflux system KefA {ECO:0000313|EMBL:CEG10613.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat
mechanosensitive ion channel MscS rbh
Displaying items 1-30 of 223 in total

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