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SCNpilot_solid_2_scaffold_137

Search features with annotation key words

Displaying items 61-90 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_137_61
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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64411..64941
DNA (531bp) protein (177aa)
Retroviral aspartyl protease domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4S3_9BRAD rbh
Retroviral aspartyl protease domain protein {ECO:0000313|EMBL:EFI52953.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
hypothetical protein; K06985 aspartyl protease family protein
SCNpilot_solid_2_scaffold_137_62
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65051..65653)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4S2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10647.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_137_63
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65795..67294
DNA (1500bp) protein (500aa)
algC; phosphomannomutase/phosphoglucomutase AlgC (EC:5.4.2.2 5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTE9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30715.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_137_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67302..68189)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4S0_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI52950.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
LysR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_137_65
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68198..69232)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK76_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10650.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
membrane protein rbh
SCNpilot_solid_2_scaffold_137_66
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69687..70202)
DNA (516bp) protein (172aa)
Transcriptional regulator, AsnC family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R8_9BRAD rbh
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EFI52948.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
AsnC family transcriptional regulator; K05800 Lrp/AsnC family transcriptional regulator
SCNpilot_solid_2_scaffold_137_67
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70288..71226)
DNA (939bp) protein (313aa)
PfkB family protein carbohydrate kinase (EC:2.7.1.-) rbh
PfkB domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R7_9BRAD rbh
PfkB domain protein {ECO:0000313|EMBL:EFI52947.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_137_68
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71380..71796)
DNA (417bp) protein (139aa)
Histidine triad (HIT) protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R6_9BRAD
Histidine triad (HIT) protein {ECO:0000313|EMBL:EFI52946.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
histidine triad (HIT) protein
SCNpilot_solid_2_scaffold_137_69
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72177..74045
DNA (1869bp) protein (623aa)
dnaX; DNA polymerase III subunit tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
DNA polymerase III, subunit gamma and tau n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNM7_AFIFE rbh
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EKS30721.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia f
SCNpilot_solid_2_scaffold_137_70
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74066..74383
DNA (318bp) protein (106aa)
Nucleoid-associated protein AfiDRAFT_0931 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R4_9BRAD
Nucleoid-associated protein AfiDRAFT_0931 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afip
hypothetical protein; K09747 hypothetical protein
SCNpilot_solid_2_scaffold_137_71
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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74385..74990
DNA (606bp) protein (202aa)
Recombination protein RecR n=2 Tax=Oligotropha carboxidovorans RepID=RECR_OLICO rbh
recR; recombination protein RecR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca
SCNpilot_solid_2_scaffold_137_72
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74994..76346)
DNA (1353bp) protein (451aa)
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4R2_9BRAD rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFI52942.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
major facilitator transporter; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG rbh
SCNpilot_solid_2_scaffold_137_73
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76492..77697)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NTG1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30725.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RmuC domain-containing protein; K09760 DNA recombination protein RmuC rbh
SCNpilot_solid_2_scaffold_137_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77857..78372
DNA (516bp) protein (172aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] rbh
Peptide deformylase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNN3_AFIFE rbh
SCNpilot_solid_2_scaffold_137_75
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78551..79483
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=666684 species="B
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] rbh
Methionyl-tRNA formyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q9_9BRAD rbh
SCNpilot_solid_2_scaffold_137_76
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79563..80366
DNA (804bp) protein (268aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] rbh
tRNA pseudouridine synthase A n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q8_9BRAD rbh
SCNpilot_solid_2_scaffold_137_77
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80463..81023)
DNA (561bp) protein (187aa)
putative nucleoside phosphorylase; K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9] rbh
Purine or other phosphorylase family 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q7_9BRAD rbh
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EFI52937.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
SCNpilot_solid_2_scaffold_137_78
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81034..82188)
DNA (1155bp) protein (385aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rul
dapE; succinyl-diaminopimelate desuccinylase DapE (EC:3.5.1.18); K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] rbh
Succinyl-diaminopimelate desuccinylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q6_9BRAD rbh
SCNpilot_solid_2_scaffold_137_79
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82192..83037)
DNA (846bp) protein (282aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811};; Tetrahydrodipicolinate N-succinyltransferase {ECO
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117); K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] rbh
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q5_9BRAD rbh
SCNpilot_solid_2_scaffold_137_80
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83276..83968)
DNA (693bp) protein (231aa)
pyrimidine 5'-nucleotidase (EC:3.1.3.5); K07025 putative hydrolase of the HAD superfamily rbh
Pyrimidine 5'-nucleotidase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q4_9BRAD rbh
Pyrimidine 5'-nucleotidase {ECO:0000313|EMBL:EFI52934.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_137_81
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84010..84897)
DNA (888bp) protein (296aa)
Acetylglutamate kinase {ECO:0000313|EMBL:EFI52933.1}; EC=2.7.2.8 {ECO:0000313|EMBL:EFI52933.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Af
argB; acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] rbh
Acetylglutamate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q3_9BRAD rbh
SCNpilot_solid_2_scaffold_137_82
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84982..85365)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52932.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_137_83
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85362..86027)
DNA (666bp) protein (222aa)
Probable GTP-binding protein EngB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q1_9BRAD rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein rbh
SCNpilot_solid_2_scaffold_137_84
unknown

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comp(86024..86203)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_137_85
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86223..88055)
DNA (1833bp) protein (611aa)
Membrane protein insertase YidC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q0_9BRAD rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC rbh
SCNpilot_solid_2_scaffold_137_86
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88059..88454)
DNA (396bp) protein (132aa)
ribonuclease P protein component RnpA; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4P9_9BRAD
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
SCNpilot_solid_2_scaffold_137_87
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89024..90457
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afi
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NX41_AFIFE rbh
signal transduction histidine kinase rbh
SCNpilot_solid_2_scaffold_137_trna_1
unknown

Not on your lists

90679..90752
DNA (74bp)
transferRNA
SCNpilot_solid_2_scaffold_137_88
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90726..91184)
DNA (459bp) protein (153aa)
Resolvase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SMV6_NITWN
resolvase
Resolvase {ECO:0000313|EMBL:ABA06385.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb
SCNpilot_solid_2_scaffold_137_89
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91201..92061)
DNA (861bp) protein (287aa)
Universal stress protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5U844_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EXL07880.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium deflu
putative universal stress protein
Displaying items 61-90 of 223 in total

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