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SCNpilot_solid_2_scaffold_137_76

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 79563..80366

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 245.0
  • Bit_score: 462
  • Evalue 3.40e-127
truA; tRNA pseudouridine synthase A (EC:5.4.99.12); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 245.0
  • Bit_score: 457
  • Evalue 2.40e-126
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4Q8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 245.0
  • Bit_score: 462
  • Evalue 2.40e-127
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGGATTACCGGGTCAAGCCCGGCAAAGATTGTCAGGATAGCCGGCTTGCACGGGCGAACATCCTGATGCCGCGCTACAAGCTCATCATCGAATATGACGGCACGCCGTTCTGCGGCTGGCAGTATCAGGACAACGGCCCTTCGGTGCAGGGCGCGCTGGAAGACGCGGTCGCGGCGCTGGCGGGCACGCACGTACGCGTTCACGGCGCGGGCCGCACTGACGCCGGCGTGCATGCGCTGGGCCAGGTCGCGCATATCGATCTTGAAAAGGCCTATCGCGCCGACCGGGTGCGCGACGCGCTGAACGCGCATCTGCGGCCGCATCCCATCGGAGTGTTATCGGCGGAGATCGTGCCGGAGACATTCGAGGCGCGGTTCTCGGCGATGAAACGTCATTACATCTATCGCATCAGCAACCGCCGGGCGAACCTTGCGCTCGATGTCGAGCGCGCGTGGCGCGTGGCGCGGCCGCTCGATGTCGCGGCGATGCAGGAAGCCGCGCATGTCTTGATCGGCAAGCACGATTTCACCACGTTCCGCGACACCGAGTGTCAGGCGAAGTCACCCGAAAAGACGCTCGATCAGCTCGATGTCATCCGCGATGGCGATGCCGTCAGCATCGTCACCTCGGCGCGTTCGTTCCTGCACAGTCAGGTGCGCTCGATGGTCGGCTCGCTGGTCTGGGTCGGCCACGGCCGCTGGACCGCCGCCGGCATGCGCGAGGCACTCGATGCGTGCGACCGTGCCGCCTGCGGTCCCGTCGCGCCGCCGGATGGGCTGTATCTGGTGAAGGTGGATTACTGA
PROTEIN sequence
Length: 268
MDYRVKPGKDCQDSRLARANILMPRYKLIIEYDGTPFCGWQYQDNGPSVQGALEDAVAALAGTHVRVHGAGRTDAGVHALGQVAHIDLEKAYRADRVRDALNAHLRPHPIGVLSAEIVPETFEARFSAMKRHYIYRISNRRANLALDVERAWRVARPLDVAAMQEAAHVLIGKHDFTTFRDTECQAKSPEKTLDQLDVIRDGDAVSIVTSARSFLHSQVRSMVGSLVWVGHGRWTAAGMREALDACDRAACGPVAPPDGLYLVKVDY*