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SCNpilot_solid_2_scaffold_133_88

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(92480..93379)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NS80_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 299.0
  • Bit_score: 525
  • Evalue 4.40e-146
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS30325.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 299.0
  • Bit_score: 525
  • Evalue 6.20e-146
HlyD family protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 299.0
  • Bit_score: 472
  • Evalue 1.40e-130
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCCCAAACGCCTGCCGCTCCTGCGTCTTTTCGTGACCCTGCTCACCCTCACCATCGCGGCGGTTGCGGGCTGGTACTTGTGGCGCACCTATGAGGACAGCCCCTGGACGCGCGACGCACGGGTGCGCGCCAATGTGGTGCAGGTGACGCCGGACGTCTCCGGCGTCGTGATTGATGTCCGTATTACGGATAACCAGAGCGTCAAGGTGGGCGACGTATTGTTCGTGATTGACCAGGCGCGCTTTCAGCTGGCGCTCTCGAACGCGGAAGCCGCGCTGGCCGGCGCGCAGAGCCTGCGCAACCAGCGCGAAGAAGAGTACGAGCGACGGCAGAAACTGAGCTCCGCCTCGATTTCGACCGAGGCTCTGGCACAAGCCCATAGCGCAGCGCTTTCCGCACAGGCCGCATACGATCAGACACTCGCAGCCCTCAATGTCGCCAAGCTCAACCTGGCTCGTACCGAGGTGCGCGCGCCGGTCAACGGCTACGTCACCAATCTGCTGCTCGACAGGGGCGATTACGCCACGGCCGGGAAGGCGATGGTGGCCGTGGTCGACAGCGACTCCTATTATGTCGCCGGCTATTTCGAGGAAACGAAACTGCGCTCGATCCATATCGGAGATAACGTCTCGATCCGGCTCCTCGGGTATAGCGACGAATTGCGCGGCCATGTCCAGAGTGTAGCGCGCGCCATCACCGACCGCGACAACGCGCCGGGGAGCGAATTGATCGCCAACGTCAATCCGACATTCAACTGGGTGCGGCTCGCGCAACGCATTCCGGTGCGCGTCGCAATCGATGATGTGCCCCACGACATCACGCTGAGCGCCGGCATGACAGCAACCGTGGTGGTGACGGGGCCCGGCGAGGTCAAGCCGTCCTCATCCAGGGCTCCTTAA
PROTEIN sequence
Length: 300
MPKRLPLLRLFVTLLTLTIAAVAGWYLWRTYEDSPWTRDARVRANVVQVTPDVSGVVIDVRITDNQSVKVGDVLFVIDQARFQLALSNAEAALAGAQSLRNQREEEYERRQKLSSASISTEALAQAHSAALSAQAAYDQTLAALNVAKLNLARTEVRAPVNGYVTNLLLDRGDYATAGKAMVAVVDSDSYYVAGYFEETKLRSIHIGDNVSIRLLGYSDELRGHVQSVARAITDRDNAPGSELIANVNPTFNWVRLAQRIPVRVAIDDVPHDITLSAGMTATVVVTGPGEVKPSSSRAP*