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SCNpilot_solid_2_scaffold_133_135

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(137555..138967)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 470.0
  • Bit_score: 931
  • Evalue 5.90e-268
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 470.0
  • Bit_score: 918
  • Evalue 6.80e-265
  • rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V152_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 470.0
  • Bit_score: 931
  • Evalue 4.20e-268
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGCCAAACCGACCACCCTGTACGACAAGATCTGGAGCGATCATCTGGTTGACGAGCAGCCCGACGGCACCTGCCTGCTCTACATCGACCGGCATCTCATCCACGAGGTGACCTCGCCACAGGCGTTCGAGGGATTGCGCACCGCTGGCCGCAAGGTGCATGCGCCGGAAAAGACCCTGGCCGTGGTCGATCATAACGTGCCGACCACCGATCGCTCCAAGCCCAACCCCGATCCGGAGAGCGCCGAGCAGATCGCGACGCTCGCCACCAATGCGCGCGATTTCGGCGTGCAGTATTTCAACGAGTTCGACAAGCGTCAGGGCATCGTTCACGTCATCGGCCCCGAGCAGGGCTTCACGCTGCCCGGCACCACGATCGTATGCGGCGACAGTCACACCTCGACGCACGGCGCGTTCGGCGCGCTGGCACATGGCATCGGCACCTCCGAGGTCGAGCACGTGCTCGCCACGCAGACGCTGATCCAGAAGAAGGCGAAGAACATGCGCGCCGTCGTTGACGGCAAGCTGCCTGAAGGCGTCACCGCGAAAGACATAATCCTCGCCATCATCGGTGAGATCGGCACCGCTGGCGGCACCGGTTACGTGCTGGAATACGCGGGCGACGCGATCCGTGCCCTCACCATGGAAGGCCGCATGACGGTCTGCAACATGTCGATTGAAGGCGGCGCGCGCGCGGGCCTCGTTGCACCCGACGAGAAAGCGTATGAATTCCTGAAAGGCCGTCCGCTGGCGCCGAAAGGCGCGCGGTGGGAAGAAGCCGTGCGCTATTGGGACACGCTGCGCAGCGACGACGGCGCGCATTTCGATGCCGAGATCCGCCTCAATGCCGCGAACCTGCCGCCGATCGTCACCTGGGGCACATCGCCGGAAGACGTCGCTTCGGTTGCAGGCTTTGTGCCTGATCCGGCGAAGATCGAGGACGAAGCCAAGCGGCTGTCGAAGGAGCGCGCGCTCGCCTATATGGGGCTGAAGGCCGGCACCAGGATCACCGACATCAAACTCGATCGCGTCTTCATCGGCTCATGCACCAACGGCCGCATCGAAGACCTGCGCGCGGCAGCGAAGGTGGTCAACGGACACACCGTCAACGGCAACGTCAATGCCATGGTGGTGCCGGGCTCGGGCCTTGTGAAGGAGCAGGCGGAAGCCGAGGGTCTCGACAAGATCTTTATCAAGGCCGGCTTTGAATGGCGCGAGCCGGGCTGCTCGATGTGCCTGGCGATGAACCCCGACAAGCTGGCGCCGGAAGAGCGCTGCGCCTCGACATCGAACCGCAACTTCGAAGGCCGTCAGGGCTTCAAGGGCCGCACCCATCTGGTGTCACCCACGATGGCGGCGGCGGCGGCGATCGCTGGACACTTCGTCGACATCCGTGACTGGAAGGCTGCGTAA
PROTEIN sequence
Length: 471
MAKPTTLYDKIWSDHLVDEQPDGTCLLYIDRHLIHEVTSPQAFEGLRTAGRKVHAPEKTLAVVDHNVPTTDRSKPNPDPESAEQIATLATNARDFGVQYFNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKLPEGVTAKDIILAIIGEIGTAGGTGYVLEYAGDAIRALTMEGRMTVCNMSIEGGARAGLVAPDEKAYEFLKGRPLAPKGARWEEAVRYWDTLRSDDGAHFDAEIRLNAANLPPIVTWGTSPEDVASVAGFVPDPAKIEDEAKRLSKERALAYMGLKAGTRITDIKLDRVFIGSCTNGRIEDLRAAAKVVNGHTVNGNVNAMVVPGSGLVKEQAEAEGLDKIFIKAGFEWREPGCSMCLAMNPDKLAPEERCASTSNRNFEGRQGFKGRTHLVSPTMAAAAAIAGHFVDIRDWKAA*