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SCNpilot_solid_2_scaffold_133_142

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(142099..143646)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V146_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 515.0
  • Bit_score: 954
  • Evalue 3.90e-275
  • rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 515.0
  • Bit_score: 953
  • Evalue 1.60e-274
ffh; signal recognition particle protein Ffh; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 515.0
  • Bit_score: 943
  • Evalue 3.70e-272
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
GTGTTCGACAATCTGTCGGAAAGGCTCGGAGGCATTCTCGACAAGCTGACGCGGCGCGGCGCGCTGTCGGAAGCCGATGTCGATGCCGCGATGCGCGAGGTGCGCCGTGCGCTGCTGGAAGCGGACGTCGCGCTCGATGTCGTGCGCTCGTTCACCGACAAGGTCCGCGAGCAGGCGATCGGCGCCACCGTCGTCAAGTCGGTGACGCCCGGCCAGATGGTCGTGAAGATCGTCCACGACCAGCTCGTGGAAACGCTCGGCGCCGACGGTCAGCTCATCGACCTCAACGCCCCCGCGCCGATCGCAATCATGATGGTCGGCCTGCAGGGCTCCGGCAAGACCACCACCACCGCAAAGCTCGCGCGCCGCCTCGTGAGCCGCGACAAGAAAAAAGTTCTGATGGCGTCGCTCGACGTCTATCGTCCGGCGGCGCAGGAACAGCTTGCGGTGCTCGGCCGCGACCTTTCCATCGAGACGCTGCCGGTCGTCGCGGGCCAGATGCCGCCGCAGATCGCGCAGCGCGCATTGCAGGCAGCCAGGCTCGGTGGCTACGATGTCGTGCTGCTCGACACCGCCGGCCGCACCACGCTCGACGAAGAGATGATGCGCGAAGCCGCGACGGTGAAAACCGCCGCCAACCCGCATGAGGTCCTGCTCGTCGCTGACTCGCTCACCGGTCAGGACGCCGTCAATCTCGCGCGCGCCTTCGATGAGCGCGTCGGCCTCACCGGCATCGTGCTGACCCGCGTCGATGGCGACGGCCGCGGTGGCGCGGCGCTGTCGATGCGCGCCGTCACCGGCAAGCCGATCAAGCTGATCGGTACGGGTGAGAAGACCGACGCGCTGGAGGACTTTCACCCCTCGCGCATCGCCAGCCGCATCCTCGGCATGGGCGATATTGTTTCGCTTGTCGAAAAGGCCGCCGCCAATATCGACGCGGAGAAGGCGGCGCGCGTTGCCGAGAAGATGCGCAAGGGCAAGTTCGATCTTGCCGATTTGCGCGAACAGCTTGCGCAAATGCAGAATCTCGGCGGCCTTGGCGGCCTGATGGGCATGATGCCCGGCATTGCCAAGATGAAGAACCAGCTCGCTGCCGCCAATCTCGACGACAGGATCGTCAAGCGGCAGATGGCGGTGATCGATTCGATGACGCGCGCAGAGCGCAAGACCCCCGACATCCTGAAGGCGAGCCGCAAGAAGCGTATCGCTGCGGGCGCGGGCGTCAGGGTCGAGGACGTCAACAAGCTCCTGAAGATGCACCGGGGCATGGCCGACATGATGAAGGCCATGGGCCAGGGTAAGCGCGGCCCGATGGCTGGCCTTGCGCAGATGATGGGCTTCGGCGGCGGCATGCCCACGCCCGAACAGATTCAGCAAATGAAGGACCAGATGCCGCAAGGGCTGCCGCAGGGCTCCGGCGGCATGCCGTCATTGCCGAAAGACTTTCCGGGCCTGCCCTCGGGATTGGGCGGCCTCGGAAAACCGACATTGCCGGGACTTGGAAAATCTCCGCTCGGGGGATTTCCGGGTCTGGGCAAGAAGAAATAA
PROTEIN sequence
Length: 516
VFDNLSERLGGILDKLTRRGALSEADVDAAMREVRRALLEADVALDVVRSFTDKVREQAIGATVVKSVTPGQMVVKIVHDQLVETLGADGQLIDLNAPAPIAIMMVGLQGSGKTTTTAKLARRLVSRDKKKVLMASLDVYRPAAQEQLAVLGRDLSIETLPVVAGQMPPQIAQRALQAARLGGYDVVLLDTAGRTTLDEEMMREAATVKTAANPHEVLLVADSLTGQDAVNLARAFDERVGLTGIVLTRVDGDGRGGAALSMRAVTGKPIKLIGTGEKTDALEDFHPSRIASRILGMGDIVSLVEKAAANIDAEKAARVAEKMRKGKFDLADLREQLAQMQNLGGLGGLMGMMPGIAKMKNQLAAANLDDRIVKRQMAVIDSMTRAERKTPDILKASRKKRIAAGAGVRVEDVNKLLKMHRGMADMMKAMGQGKRGPMAGLAQMMGFGGGMPTPEQIQQMKDQMPQGLPQGSGGMPSLPKDFPGLPSGLGGLGKPTLPGLGKSPLGGFPGLGKKK*