ggKbase home page

SCNpilot_solid_2_scaffold_133_150

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(150982..151422)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V137_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 146.0
  • Bit_score: 265
  • Evalue 3.10e-68
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFI53417.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 146.0
  • Bit_score: 265
  • Evalue 4.40e-68
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 145.0
  • Bit_score: 234
  • Evalue 1.80e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGACGGCGCAAAAGCGCATATCTGCTCTGCCTCGCAGCGTGGCCATTAAGGACAAGGACTATTTCGTGCTGGCCTCGTTCCGCCGCGAGTTGCGGAATTTTCTCAATTTTAGCGAGCAGGCGGCGCAAAAGCGCGGCCTGACACCGAAGCAACATCAGGCGATTCTGGCGATTCGCGGGTTTGACGAGGAGGGCGGTGTGACGGTCGGAGACCTCGCCGATCACCTCCATCTCAAGCACCATACCGCGGTCGAACTGGTGGACCGGCTGGTGCGGGCCAAACTGGTGGTGCGCAAAACCGACAAGGAAGACCGCCGCCGCGTGTTGCTGAACCTGACCGGAAAGGCCAACGCCGCGCTCAAGGGGCTGTCCGGCATTCACATGGCGGAAATCCGCCGCAACGCGCCGGGCATGATCAAGCTGCTGAAGCAGCTGGGCTGA
PROTEIN sequence
Length: 147
MTAQKRISALPRSVAIKDKDYFVLASFRRELRNFLNFSEQAAQKRGLTPKQHQAILAIRGFDEEGGVTVGDLADHLHLKHHTAVELVDRLVRAKLVVRKTDKEDRRRVLLNLTGKANAALKGLSGIHMAEIRRNAPGMIKLLKQLG*