ggKbase home page

SCNpilot_solid_2_scaffold_133_176

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 189589..192930

Top 3 Functional Annotations

Value Algorithm Source
Helicase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GC04_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 999.99
  • Bit_score: 1958
  • Evalue 0.0
  • rbh
Helicase {ECO:0000313|EMBL:EQA98181.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25. similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 999.99
  • Bit_score: 1958
  • Evalue 0.0
type III restriction protein res subunit similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 999.99
  • Bit_score: 1799
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3342
ATGGCATCACGCAAGCGCGCCGCCAACTCAGACCAGGACGACCTCTTCAATGAGGCCGTCTCGCTGCTACTGCCCCCACGCTTTGCGATCGACAGCAAGGTGCTCGGAAGCTCGGTGCGGCAACTGGCGGTCCCCGCCCTGCGCGAGATTTGTCGTCTCCAGCCATTCTCGATCCGACGCGTCAACGGCTACGAAGCTATCCTGTCTTCCGGCGAGACCCTGAAGATCATCAGTTCACGGACGGCCACGCAGCTCGACGCCGATCTCGTCCTGCTTGTGCCGGAGGCGTCGGAACCGTCCAAGATCGCCGAGGCCCTCGAACTGGGCGAAGGCCGGTGGATGAATGTCATACCGACCGACATCGGCGCGCTCGATGCGGTCGCGCGACGCGAACGGCTCGCCGCGGTCACGGACTCTTGGCAGGATGCGTTTCATCTCCGCGAGAGCCGTCCTGCCGAGAATGGTCGGGCTGCGCTGCGTGGACTACGCCGACCCCAGATCGGCGCGCTTCACGCCGCGCTCGCCCATGCTACACGGTCGAACGAACCCGCCACCATCGTCATGCCGACAGGCACCGGAAAAACGGAGACGATGCTGGCGCTGAACGCCCATCAGCGGTTTGAACGCCTGCTGGTCGTCGTCCCGACCGATGCGCTCCGCGAACAGATCGCCGGGAAGTTCGAGACCTTCGGCGTTCTCAAGCAACAGGATTGCCTCGACGCCGCCGCTGTTTTCCCTGTGGTGGTGCGTCTCTCCCATATTCCCACGACCCTGGCGGAGGTGGACCAGATCTTCGACAGCGGGAATGTCGTGGTCACAACGATGCAGATCGCGGGTCGCGCCGAGGCTCCGGTTCAGGAGCGGATGGCGGCGCGTGCATCCGCCCTTTTTATCGACGAAGCACACCATATCGGCGCGCCGACCTGGGCGCGTTTTCGCAGTCTCTTCGTCGATCGCGACCCGCCGCTGCCCATCGTTCAATTCACCGCCACGCCGTTTCGTGAGGATGGCCGGCGGGTCGATGGCGAGTTCATCTACACCTATCCGCTCAAGAGGGCGCAGGACGAAGGCTATTTCAAACCGATCCGCTTCGAGGCTGTTTTCGGCCTGGATCAGGCCGACGCGGATCCGGCGATCGCCGAAAAGCTCGGCGAAGTCCTACAGAGTGATCTGGATGCAGGGCTCAACCATCTCGCCATGGCGCGCTGTCAGACGATCGACCGTGCCAGAGACCTGCATCAGCTCTACAGCGCGATGTTTCCCCAGTTCCACACCGTCATCGTTCATAGTCAGCAGTCGACTCGCGAGCGGCGGGCAAACCTGGCCGCGCTCCGACGCTTCGAAAGCCGCATCATCGTCTGTGTCGATATGCTGGGCGAAGGTTTCGACCTTCCAGAACTCAAGATCGCGGGCCTGCACGATCCGCACAAGAGCATCGCCGTCACCATCCAGTTCGTCGGCCGCTTCACCCGACAGGATCCTCGGCTCGGCGACGCAACAGTAATCGCCAACACCGGCGTCGATGATATCGACCGGTCATTGGCCAAGCTTTACGCCGAAGACGCCGACTGGAATACCTTGGTCGAGGCGTTAAGCACGGCCAAGATCGATCGGCAGGTCCGGCGTGCTGAGATGTTCAAGGGCTTCGTCGGCGACCTCAGTGACATTCCGCTGCAGACGCTTGAGCCGAAGATGAACGCTGTCGTCTATCGGACGACCTGCGACGCCTGGGAGCCATTGCGCGCCGAGGATCTCTACAACCCCGGCGTCTATCTCGGAATGAAGGTCAATCCGCACCAGCGCGTCGCCATCTTCGTCACCCGCTCGGAGGAACAGGCGGGGTGGACGACGGCCCAACATGCAACCAACGTCATCTGGGACCTGCATATGATGCACTGGGATCCCGCAAAGGGACTCCTCTATATCAGCAGTTCGGCCAAAGGCCCCTATGACCGGTTGGCCAAGACTATCTGCGGTGACACAGCGCGACGAGTCGAGGGCGAGGAGGTGTTCCGCAGCCTGCACGGTTTTAATCGCCTCATCCTGCGCAATCTCGGCCTGACCCACCATCAAGGCCGGGGCGTGCGCTATTCCATGTACATGGGAGTCGATGTCGCCGATGGGCTGGATGCCGCCAAGTCGCAGTCCCGAATCAAGAACAACGTCTTCGCAACCGGCTTTCTTGATGGCGTCCCAGCCTCACGCGGCTGCTCGGCCAAAGGCAAGTTCTGGTCGATTGCGCCTGTCCGCGATCTCGCTGATTGGGTCGAATGGTGCGCCGATATCGGCCAGGCCGTGAACGATCCCGGCATCACGACTGATGGTGTCTTCAAGAGCGCGATGCGGCCGCGCCAGATCGGCGAGCGGCCCGCCGTCCCGCCAGTCGCCATTCACTGGCCGGAATCGCTCCTGATGCAGATCGAGGATCGGGTCGAGATCATTTTTGACGATCAGCCGGTCGTATTCACCGAATGCGATATCGAGCTGCTCGACCATGAACGAACGGGGCCGCTGCGCTTTGCAGTGCGCAACGACCTTCATGTCGCGGAATTCGAGATCCAGTTCAGCGAGGGCGGCGCCCGATATCCGCAGCGCGCCGGCCCCAAGGCCTCGATCAAGGTTGGCGGCAAGGTGAAAACATTGTCCGAGTCCTTCGGAGATGATTCCCCGCAGATCGATTTCGGGGACGGCTCGCTTTTGATTTACAGCCATCTCTACGCCTTGCCGGATGGTGTTGCTGTCGAACCTTATCCCGCTGATCAGATCGAGGCATGGGATTGGTCGAGAACCAACATCAGGGCTGAGAGTCAGGGACCCGAGAAGCGCGCGGACTCCGTCCAGCGGCACGTGATCGACCTGCTGCTCGCCGATGGGGAAGCCTGTGACATCGTCTTTGATGATGACGGCGCTGGCGAGATCGCGGACGTCGTTACACTTCGCGTGACCGAAGGCTTGGTGCAGGTCACGCTCTATCACTGCAAGTATTCCAGCGATGTCACTCCCGGCGCCCGCGTCAAAGACCTTTATGAGGTCTGCGGGCAAGCCCAGAAATCTGCCCGGTGGCGCGATCGACCCAGCCGCATGTTCACGCATATGCTGAAGCGCGAAAAGCTGCGCCTCGACAAGGGGCGGAGCTCTCGCTTTGAGCACGGCAATGCTGCGGTTCTCAAGAAGCTGAAGGCGAGCTGGCAGGACTATCGCTATGAATTCGATGTTCGCATCGTACAGCCAGGCCTGTCGCGAGCGTCGATCACCGAGGAAGGCCTGCATTTGCTGGCTGGAGTGGAGACGTATCTGCTGGAGACCCGCGCGATGAAATTGCGGGTCATTGGCAATGCGTAG
PROTEIN sequence
Length: 1114
MASRKRAANSDQDDLFNEAVSLLLPPRFAIDSKVLGSSVRQLAVPALREICRLQPFSIRRVNGYEAILSSGETLKIISSRTATQLDADLVLLVPEASEPSKIAEALELGEGRWMNVIPTDIGALDAVARRERLAAVTDSWQDAFHLRESRPAENGRAALRGLRRPQIGALHAALAHATRSNEPATIVMPTGTGKTETMLALNAHQRFERLLVVVPTDALREQIAGKFETFGVLKQQDCLDAAAVFPVVVRLSHIPTTLAEVDQIFDSGNVVVTTMQIAGRAEAPVQERMAARASALFIDEAHHIGAPTWARFRSLFVDRDPPLPIVQFTATPFREDGRRVDGEFIYTYPLKRAQDEGYFKPIRFEAVFGLDQADADPAIAEKLGEVLQSDLDAGLNHLAMARCQTIDRARDLHQLYSAMFPQFHTVIVHSQQSTRERRANLAALRRFESRIIVCVDMLGEGFDLPELKIAGLHDPHKSIAVTIQFVGRFTRQDPRLGDATVIANTGVDDIDRSLAKLYAEDADWNTLVEALSTAKIDRQVRRAEMFKGFVGDLSDIPLQTLEPKMNAVVYRTTCDAWEPLRAEDLYNPGVYLGMKVNPHQRVAIFVTRSEEQAGWTTAQHATNVIWDLHMMHWDPAKGLLYISSSAKGPYDRLAKTICGDTARRVEGEEVFRSLHGFNRLILRNLGLTHHQGRGVRYSMYMGVDVADGLDAAKSQSRIKNNVFATGFLDGVPASRGCSAKGKFWSIAPVRDLADWVEWCADIGQAVNDPGITTDGVFKSAMRPRQIGERPAVPPVAIHWPESLLMQIEDRVEIIFDDQPVVFTECDIELLDHERTGPLRFAVRNDLHVAEFEIQFSEGGARYPQRAGPKASIKVGGKVKTLSESFGDDSPQIDFGDGSLLIYSHLYALPDGVAVEPYPADQIEAWDWSRTNIRAESQGPEKRADSVQRHVIDLLLADGEACDIVFDDDGAGEIADVVTLRVTEGLVQVTLYHCKYSSDVTPGARVKDLYEVCGQAQKSARWRDRPSRMFTHMLKREKLRLDKGRSSRFEHGNAAVLKKLKASWQDYRYEFDVRIVQPGLSRASITEEGLHLLAGVETYLLETRAMKLRVIGNA*