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SCNpilot_solid_2_scaffold_68_18

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 18815..20623

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease MsbA (EC:3.6.3.-); K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 602.0
  • Bit_score: 1011
  • Evalue 9.90e-293
  • rbh
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2K2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 602.0
  • Bit_score: 1099
  • Evalue 0.0
  • rbh
ABC transporter related protein {ECO:0000313|EMBL:EFI52182.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.; similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 602.0
  • Bit_score: 1099
  • Evalue 0.0

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGGGAATGAGCAAGGCTCCCCGCAAAATCACCGATGACCCCTATGGCGCAGCCGGGCTGATCAAGCGGCTGGTGGCCGAACAGGGCCTCGCCTATTGGCGCCGTTACGCGCTCGCCTTCGGCATGATGGGGTTGTCCGCAGCCGCGACTGCAGGCTCCGCCTATCTGCTCGGGCAAGTCATCAACCAGGCCTACGTCAATCGCAGCATCTCGGGCATCGTTACCCTGTCCGCGATCATTATCGCGCTGTTCACCATCAAGGGCGCGGCGACTTACGGGCAGGCCGTGATCATGTCGCGGATCAGCAACGCCATTCTCGCCAACAATCAGCGCAGGCTGTTCGCCAAGCTGATGCGCGAGAATGTGGCATTCTATTCGGAACGCCACTCCTCCGAATTTCTCGCCCGTCTCTCGGCCGGCGCATCCGCCGTCACGCAGGTGCTGGCATTGCTCGTCACCTCGCTCGGGCGTGATCTCCTGTCATTGATCGGTCTCTTGGTGGTGATGGTCGTGCAGGACCCGATCATGTCGCTATTGAGCTTCGTGGTCGCACCGCCTGCGTTTCTGTTCATTCGCACGCTCGTCAAGCGCATCCGTCATCTCGCGCACGACCAGTTTACCGGTACCACGAACATCATGGAGACGGTGCAGGAGTCGCTGCAGGGTATCCGCACCGTGAAAGCCTTCACGCTCGAGGAAGCGATGCAGGCCCGCGTCAACAAGAGCATCGCCGACGTCGAAGGCTATTCCAACACGATGGCGCGGGTCTCCAACCGCTCTGGCCCGTTAATGGAAATACTGGGCGGCGTCGCCATCGCGAGCGCGCTGATGTATGGCGGCTACCGCGTGGTCGCGACCGACGCTGCCCCCGGCCAGTTCGTCTCCTTCATCACTGCCTTCCTGCTCGCCTACGAGCCCGCCAAGCGGCTCGCGCGCCTCAACATCGACCTCAACGGGCTTCTTGTCGGCGCCCGGAAACTGCTGGAAATCATCGACAGCCCCGCGTCGGAGCCGAACGACGACAACAAACCGCCGCTGCAACTCACGCAAGGCCGTGTCGAACTGCGCGATGTGACCTTCTCCTATCGCGTCGACGAACCGGTGCTGAAACGAATGAGTTTCGTCGCAGAGCCCGGCCAGACAACGGCGCTGGTCGGCCCCTCGGGTGGCGGCAAGTCCACCGTGCTGGCGCTGCTGCTGCGGCTCTACGAAGTGGATCGCGGTGCCATCGTTATCGACGACCAGATCATCTCCGACTGCTCACGTGCGTCGCTGCGCCAGCAGACCGCCTATGTCGGGCAGGACGTCTACCTGTTCCGTGGCAGCGTCCGCGAGAACATCGCCTTTGGCCGCATCGGCGTGACCGAGGATGAGATCATCGCCGCCGCAAAGATGGCGTTTGCGCACGACTTCATCATGAGCTTTCCGCAGGGCTACGATACGCCGGTCGGCGAGCACGGCACGCAACTATCGGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGCGCGCTGGTGAAGAACGCGCCGATCATCCTGCTGGACGAGGCCACCGCCGCGCTCGATTCGGAATCGGAGAAATACGTGCAGGAGGCGATCGGCCACCTCCGCCAGGGCCGCACCACCATCGTCATCGCGCACCGGCTTCACACCATCATGCATGCGGACCGCATTCTTGTGATCGAAGGCGGCGAGATCGTCGAAACCGGCCAGCATGACGAACTGCTGCGCGCCAACGGGCGCTACGCCTCGTTCTTCCGCCTGCAGCAGCGCGAGGAACACAACGTCACTCCGCTTGCCGCCAACGCCTAG
PROTEIN sequence
Length: 603
MGMSKAPRKITDDPYGAAGLIKRLVAEQGLAYWRRYALAFGMMGLSAAATAGSAYLLGQVINQAYVNRSISGIVTLSAIIIALFTIKGAATYGQAVIMSRISNAILANNQRRLFAKLMRENVAFYSERHSSEFLARLSAGASAVTQVLALLVTSLGRDLLSLIGLLVVMVVQDPIMSLLSFVVAPPAFLFIRTLVKRIRHLAHDQFTGTTNIMETVQESLQGIRTVKAFTLEEAMQARVNKSIADVEGYSNTMARVSNRSGPLMEILGGVAIASALMYGGYRVVATDAAPGQFVSFITAFLLAYEPAKRLARLNIDLNGLLVGARKLLEIIDSPASEPNDDNKPPLQLTQGRVELRDVTFSYRVDEPVLKRMSFVAEPGQTTALVGPSGGGKSTVLALLLRLYEVDRGAIVIDDQIISDCSRASLRQQTAYVGQDVYLFRGSVRENIAFGRIGVTEDEIIAAAKMAFAHDFIMSFPQGYDTPVGEHGTQLSGGQRQRIAIARALVKNAPIILLDEATAALDSESEKYVQEAIGHLRQGRTTIVIAHRLHTIMHADRILVIEGGEIVETGQHDELLRANGRYASFFRLQQREEHNVTPLAANA*