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SCNpilot_solid_2_scaffold_68_85

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(94871..96991)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 706.0
  • Bit_score: 1275
  • Evalue 0.0
ligA; DNA ligase LigA (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 706.0
  • Bit_score: 1225
  • Evalue 0.0
  • rbh
DNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2S1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 706.0
  • Bit_score: 1275
  • Evalue 0.0
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2121
ATGGCTGTTAAGGCAAAAAAGGTGGTAACACCGGTCGAAAACCTCACCAAGGCACAAGCCAAGGTCGAATTGACGCGTCTTGCGCTTGAAATCTCGATGCACGACGAGCGCTATTATCAGAACGACGCACCGACGATCTCGGACGCGGACTACGACAGGCTGCGCCTGCGCCTCAACGCCATCGAGGAACGTTTTCCCGAGCTGGTGGCGAAGGATTCACCATCGCAGAAGGTCGGCGCGCAGCCCTCGCGTGCGTTTGGGAAAATTCGTCACGCCGTGCCGATGCTCTCGCTCGGCAATGCCTTCAGCGACGAGGATGTCGCGGAATTCGCCACGCGCGTGCGGCGTTTCCTGAATCTTGGCGCCGGCGAGCCGCTTGCGATTGTCGCCGAGCCGAAGATCGATGGGCTGTCTTTGTCGCTCCGCTATGAAAATGGTGAGCTCGTCAATGCCGCAACGCGCGGCGATGGCTTTGAGGGCGAGGACGTCACCGCCAACGTCCGCACCATTAGGGACGTGCCGCATAAGCTGAAGGGAAAGAACATCCCGGCCATCTGCGAGGTGCGCGGCGAAGTCTACATGCTGCGCGAGGATTTCCTCGCGCTGAACAAGAAGCAGGCCGAGGCGGACGACACCATCTTCGCCAATCCGCGAAATTCCGCCGCCGGCTCGCTGCGGCAGAAGAACGTCGAAGTGACCGCCTCGCGGCCGCTGAAGTTCTTCGCCTATGCCTGGGGCGAGATGAGCGAAATGCCCGCTCCGACGCAGTTCGAGATGGTGAAGTGGCTCGGCAAGGCGGGTTTCGTCGTCAATCCGCGCATGACGCCGTGTCGCGATGTCGAGGCGCTGCTGACATACTACCGCGAGACCGAGACCGAACGCGCCACGTTGTCGTATGATATCGACGGCGTGGTCTACAAGGTTGATCGACTCGACTGGCAGAATCGATTGGGGTTTATCTCGCGCAGCCCGCGCTGGGCAATCGCGCACAAGTTCGCAGCCGAGCAGGCGACCACCGTGCTGGAGAAGATCGACATCCAGGTCGGCCGCACCGGCGCGCTGACGCCGGTGGCGCGGCTGACGCCGGTGACGGTCGGCGGCGTCGTGGTGCAGAATGCGACGTTGCACAACGAGGACGAGATCGCCCGCAAGGACATCCGCGAGGGCGACACCGTGGTGATCCAGCGCGCGGGCGACGTGATCCCGCAGGTCGTCAGTGTGGTGATGGAGAAGCGGCCGAAACATTCGACGCCGTATTCCTTTCCGCATAAATGCCCGATCTGTGGCAGTCATGCAGTGCGAGAGGAAGGCGAGGCCGTGCGTCGCTGCACCGGCGCGCTGATCTGCCCGGCGCAGGCGGTTGAGGGTCTCAAACATTTTGTCTCGCGGCTTGCCTTCGACATCGAAGGCCTCGGTGACAAGCAGATCCACGAATTCTACGATGGCGGGTTGATCAAGCATCCTGTCGATATCTTCACCCTCGAGAAGCGAGATGCGCATGCGTCCGGCAAGCTCAAGGATCGCGAGGGTTATGGTGAGACGTCGGTGCGTAATCTGTTCGCCGCGATCGATGCGCGGCGCCGGATCGAACTCAATCGGTTGATCTTTGCACTCGGCATCCGCCATGTCGGCGAAGGCAATGCCAAGCTGCTGGCGCGTCATTACGACAGCATCGAAAACCTGCGCGCAGCAATGGCGGAGGCTGCCGCGGCGCAAACGGAAGGCGACAACACGTCGGAGGCCTATGCCGATCTGAATAATATCGGCGGCATCGGCGACATCGTGGCTAATGCGGTGGTGGAATTCTTTGCGGAGAAGCGCAACGTCAAGGCGTTGGACGAACTGCTCGCTGAGATCGAGGTGCTGCCAGCCGAACAGGCGCGCATCGGTTCCGCCGTCGCCGGGAAAACCGTCGTTTTCACCGGCTCGCTGACGAAATTCACCCGCGAAGAGGCCAAGGCGCAGGCCGAGCGGCTGGGCGCAAAAGTTTCCGGCTCGGTGTCGAAGAAGACCGACTACGTGGTCGCGGGCGAGGAAGCGGGCTCCAAGCTCACCAAGGCGCGTGAACTGGGCGTCGCGGTGCTCACCGAGGATGAGTGGCTGAAGTTGACGGAAGGTTGA
PROTEIN sequence
Length: 707
MAVKAKKVVTPVENLTKAQAKVELTRLALEISMHDERYYQNDAPTISDADYDRLRLRLNAIEERFPELVAKDSPSQKVGAQPSRAFGKIRHAVPMLSLGNAFSDEDVAEFATRVRRFLNLGAGEPLAIVAEPKIDGLSLSLRYENGELVNAATRGDGFEGEDVTANVRTIRDVPHKLKGKNIPAICEVRGEVYMLREDFLALNKKQAEADDTIFANPRNSAAGSLRQKNVEVTASRPLKFFAYAWGEMSEMPAPTQFEMVKWLGKAGFVVNPRMTPCRDVEALLTYYRETETERATLSYDIDGVVYKVDRLDWQNRLGFISRSPRWAIAHKFAAEQATTVLEKIDIQVGRTGALTPVARLTPVTVGGVVVQNATLHNEDEIARKDIREGDTVVIQRAGDVIPQVVSVVMEKRPKHSTPYSFPHKCPICGSHAVREEGEAVRRCTGALICPAQAVEGLKHFVSRLAFDIEGLGDKQIHEFYDGGLIKHPVDIFTLEKRDAHASGKLKDREGYGETSVRNLFAAIDARRRIELNRLIFALGIRHVGEGNAKLLARHYDSIENLRAAMAEAAAAQTEGDNTSEAYADLNNIGGIGDIVANAVVEFFAEKRNVKALDELLAEIEVLPAEQARIGSAVAGKTVVFTGSLTKFTREEAKAQAERLGAKVSGSVSKKTDYVVAGEEAGSKLTKARELGVAVLTEDEWLKLTEG*