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SCNpilot_solid_2_scaffold_83_3

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(2186..2749)

Top 3 Functional Annotations

Value Algorithm Source
HdeD protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 187.0
  • Bit_score: 354
  • Evalue 6.50e-95
  • rbh
Acid-resistance membrane protein {ECO:0000313|EMBL:CEG06889.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 187.0
  • Bit_score: 354
  • Evalue 9.10e-95
putative transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 187.0
  • Bit_score: 339
  • Evalue 8.90e-91
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCATTTCAGACGGATCACGTCACAGTCTCGGCAACGCCCTGCATTCCCTCCGCGCAAAGTGGGGATGGATTCTTGCACTTGGTATTGTGTATCTCGTTGCCGGCATCATCGCGCTCGGCAATGAACTCTTCAGCACCGTCGTTTCGGTAGCCATTATCGGCGCCGTGATGTTCGTGTCGGGGGTTTTCGAGATCATCAGTGCGTTTCAGATGAAGACGTGGGGCAGCTTCTTCCTCTGGATTTTGCTGGGTGCGCTTTACGCCATCGCCGGCGTCTTTGTGTGGGTCAATCCGCTGCTTGCGGCTGGCGTATTTACCCTCCTGATCGGCATCGCCCTCATTGCTTCAGGTCTGGTGCGCATATTCCTGGCCTTCCGGTTGCCGGACACTGCGCCGCGCTTCTGGATTTGTCTCTCAGGCGCAATCACCGTGCTCCTCGGCGCAATCATTCTCACCCATTGGCCGGTTTCCAGCCTGTACGTCCTCGGGCTGTTTCTGGGGATCGATCTTTTATTTGCCGGATTTGGCTGGATCGGAATGGCGCTCAAGCTCCGCCACTGA
PROTEIN sequence
Length: 188
MSISDGSRHSLGNALHSLRAKWGWILALGIVYLVAGIIALGNELFSTVVSVAIIGAVMFVSGVFEIISAFQMKTWGSFFLWILLGALYAIAGVFVWVNPLLAAGVFTLLIGIALIASGLVRIFLAFRLPDTAPRFWICLSGAITVLLGAIILTHWPVSSLYVLGLFLGIDLLFAGFGWIGMALKLRH*