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SCNpilot_solid_2_scaffold_83

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Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_83_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

670..1263
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52529.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_83_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1401..1859
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR12_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30869.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_83_trna_1
unknown

Not on your lists

2018..2091
DNA (74bp)
transferRNA
SCNpilot_solid_2_scaffold_83_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2186..2749)
DNA (564bp) protein (188aa)
HdeD protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J8_9BRAD rbh
Acid-resistance membrane protein {ECO:0000313|EMBL:CEG06889.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
putative transmembrane protein rbh
SCNpilot_solid_2_scaffold_83_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3232..4584
DNA (1353bp) protein (451aa)
Twin-arginine translocation pathway signal n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J7_9BRAD rbh
Leucine ABC transporter subunit substrate-binding protein LivK {ECO:0000313|EMBL:CEG06890.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.
high-affinity branched-chain amino acid ABC transporter substrate-binding-protein rbh
SCNpilot_solid_2_scaffold_83_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4738..5613
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J6_9BRAD rbh
LIV-I protein H {ECO:0000313|EMBL:CEG06891.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease ba
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_solid_2_scaffold_83_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5627..7495
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXF4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30873.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
livG5; ABC transporter, putative high-affinity branched-chain amino acid transport ATP-binding protein LivG; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chai rbh
SCNpilot_solid_2_scaffold_83_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7492..8190
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR16_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30874.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
livF5; ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_solid_2_scaffold_83_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..8695)
DNA (426bp) protein (142aa)
Histidine triad (HIT) protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J3_9BRAD
Histidine triad (HIT) protein {ECO:0000313|EMBL:EFI52523.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
histidine triad; K02503 Hit-like protein involved in cell-cycle regulation
SCNpilot_solid_2_scaffold_83_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8726..9406)
DNA (681bp) protein (227aa)
Extracellular solute-binding protein family 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J2_9BRAD rbh
Molybdate ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:CEG06895.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia
putative periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein rbh
SCNpilot_solid_2_scaffold_83_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9685..10284
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
sodB; superoxide dismutase (Mn) (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] rbh
Superoxide dismutase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKN6_AFIFE rbh
SCNpilot_solid_2_scaffold_83_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10405..10779
DNA (375bp) protein (125aa)
Putative fluoride ion transporter CrcB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3J0_9BRAD
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fe
crcB; camphor resistance protein CrcB; K06199 CrcB protein
SCNpilot_solid_2_scaffold_83_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10884..11150
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06898.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_83_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11147..11902
DNA (756bp) protein (252aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I8_9BRAD rbh
Putative zinc transport system ATP-binding protein AdcC {ECO:0000313|EMBL:CEG06899.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" sour
manganese transport system ATP-binding protein MntA; K02074 zinc/manganese transport system ATP-binding protein rbh
SCNpilot_solid_2_scaffold_83_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11902..12768
DNA (867bp) protein (289aa)
ABC-3 protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I7_9BRAD rbh
ABC-3 protein {ECO:0000313|EMBL:EFI52517.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ABC-3 protein; K02075 zinc/manganese transport system permease protein
SCNpilot_solid_2_scaffold_83_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12985..14073
DNA (1089bp) protein (363aa)
Cobalamin synthesis protein P47K n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I6_9BRAD rbh
Putative GTP-binding protein YjiA {ECO:0000313|EMBL:CEG06901.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
putative cobalamin biosynthesis CobW-like protein rbh
SCNpilot_solid_2_scaffold_83_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14084..15106
DNA (1023bp) protein (341aa)
Beta WD-40 repeat-containing G-protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG06902.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
beta WD-40 repeat-containing G-protein rbh
SCNpilot_solid_2_scaffold_83_17
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15283..16002
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR25_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30884.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein rbh
SCNpilot_solid_2_scaffold_83_18
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16132..16458
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52514.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_83_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16595..18040)
DNA (1446bp) protein (482aa)
hss; homospermidine synthase Hss (EC:2.5.1.44); K00808 homospermidine synthase [EC:2.5.1.44] rbh
Homospermidine synthase Hss {ECO:0000313|EMBL:AEI07726.1}; EC=2.5.1.44 {ECO:0000313|EMBL:AEI07726.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiace
Homospermidine synthase (HSS) n=2 Tax=Oligotropha carboxidovorans RepID=B6JAX5_OLICO rbh
SCNpilot_solid_2_scaffold_83_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18188..19174)
DNA (987bp) protein (329aa)
Cation diffusion facilitator family transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I2_9BRAD rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EFI52512.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
czcD2; cadmium, cobalt and zinc/H(+)-K(+) antiporter CzcD; K03295 cation efflux system protein, CDF family rbh
SCNpilot_solid_2_scaffold_83_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19264..19680)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXG7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30888.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
greA2; transcription elongation factor GreA; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_solid_2_scaffold_83_22
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19958..20347)
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I0_9BRAD
Endoribonuclease L-PSP {ECO:0000313|EMBL:EFI52510.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
endoribonuclease L-PSP
SCNpilot_solid_2_scaffold_83_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20401..20991)
DNA (591bp) protein (197aa)
GCN5-related N-acetyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H9_9BRAD rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFI52509.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
acetyltransferase
SCNpilot_solid_2_scaffold_83_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21114..22256)
DNA (1143bp) protein (381aa)
ornithine decarboxylase; K01581 ornithine decarboxylase [EC:4.1.1.17] rbh
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H8_9BRAD rbh
Lysine/ornithine decarboxylase {ECO:0000313|EMBL:CEG06908.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
SCNpilot_solid_2_scaffold_83_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22916..23176)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06909.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_83_26
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23305..25407
DNA (2103bp) protein (701aa)
dcp; peptidyl-dipeptidase M3A/M3B (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5] rbh
Peptidyl-dipeptidase Dcp n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H6_9BRAD rbh
Peptidyl-dipeptidase dcp {ECO:0000313|EMBL:CEG06910.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
SCNpilot_solid_2_scaffold_83_27
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25477..26502
DNA (1026bp) protein (342aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
hemH; ferrochelatase HemH (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1] rbh
Ferrochelatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H5_9BRAD rbh
SCNpilot_solid_2_scaffold_83_28
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26748..27734
DNA (987bp) protein (329aa)
Band 7 protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H4_9BRAD rbh
Modulator of FtsH protease HflK {ECO:0000313|EMBL:CEG06912.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat sc
qmcA; protein QmcA rbh
SCNpilot_solid_2_scaffold_83_29
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27745..28188
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3H3_9BRAD
Inner membrane protein YbbJ {ECO:0000313|EMBL:CEG06913.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
hypothetical protein; K07340 hypothetical protein
Displaying items 1-30 of 206 in total

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