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SCNpilot_solid_2_scaffold_83_22

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(19958..20347)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease L-PSP n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3I0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 246
  • Evalue 1.30e-62
Endoribonuclease L-PSP {ECO:0000313|EMBL:EFI52510.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 246
  • Evalue 1.90e-62
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 128.0
  • Bit_score: 199
  • Evalue 5.80e-49

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGTCTCGCCGTCTGATTTCATCCGGTTCCCCCTTCGAGAAGGCCGCGGGTTACAGCCGCGCCGTTGTGGAAGGCGACATGTGTTTCGTCGCCGGCACCACGGGCTACGATCCCGTCACCAAGGTTCTGCCCGAAGATGTGAGCGAGCAGACGCGCAACTGCTTCAAGGTGATCGCCGACGCGCTGAAGGATGGCGGCTTCGAGATGACCGATCTCGTCCGCGCGACCTATTACGTTACCGACGCGAAGGACTTCGATGCGGTGTTCAAGGCCTGCGGCGAAACGCTCGGTGACATTCGCCCTGCAGCGACGATCATTGCGGTGTCGGCTCTCTACAAGCCGGAGATGAAGATCGAGATCGAAATCACCGCAAAACGTCGCTCAGCCTGA
PROTEIN sequence
Length: 130
MSRRLISSGSPFEKAAGYSRAVVEGDMCFVAGTTGYDPVTKVLPEDVSEQTRNCFKVIADALKDGGFEMTDLVRATYYVTDAKDFDAVFKACGETLGDIRPAATIIAVSALYKPEMKIEIEITAKRRSA*