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SCNpilot_solid_2_scaffold_83

Search features with annotation key words

Displaying items 151-180 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_83_149
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156131..159220)
DNA (3090bp) protein (1030aa)
pdhS; cell division control histidine kinase PdhS (EC:2.7.13.3) rbh
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V338_9BRAD rbh
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:EFI52368.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source
SCNpilot_solid_2_scaffold_83_150
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159598..159972
DNA (375bp) protein (125aa)
Phasin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V337_9BRAD
Phasin {ECO:0000313|EMBL:CEG07148.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;
hypothetical protein
SCNpilot_solid_2_scaffold_83_151
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

160122..160547
DNA (426bp) protein (142aa)
Phasin n=1 Tax=Afipia sp. 1NLS2 RepID=D6V336_9BRAD
Phasin {ECO:0000313|EMBL:EFI52366.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_83_trna_4
unknown

Not on your lists

comp(160958..161031)
DNA (74bp)
transferRNA
SCNpilot_solid_2_scaffold_83_152
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161157..161375
DNA (219bp) protein (73aa)
integrase n=1 Tax=Xanthobacteraceae RepID=UPI000367846D
Prophage CP4-57 integrase {ECO:0000313|EMBL:CEG07150.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
integrase family protein
SCNpilot_solid_2_scaffold_83_153
unknown

Not on your lists

161654..162046
DNA (393bp) protein (131aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_83_154
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162082..164481)
DNA (2400bp) protein (800aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V332_9BRAD rbh
Bacteriophytochrome cph2 {ECO:0000313|EMBL:CEG07153.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d
PAS/PAC and MHYT sensor-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_solid_2_scaffold_83_155
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164655..165071)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V331_9BRAD
Copper-sensitive operon repressor {ECO:0000313|EMBL:CEG07154.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
hypothetical protein
SCNpilot_solid_2_scaffold_83_156
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165120..167381
DNA (2262bp) protein (754aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V330_9BRAD rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EFI52360.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
copper-translocating P-type ATPase
SCNpilot_solid_2_scaffold_83_157
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167853..168776)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V329_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI52359.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
LysR family transcriptional regulator rbh
SCNpilot_solid_2_scaffold_83_158
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168779..169744)
DNA (966bp) protein (322aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; A
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
Thioredoxin reductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V328_9BRAD rbh
SCNpilot_solid_2_scaffold_83_159
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170020..170493
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRT3_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31159.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
HTH transcriptional regulatory, MarR
SCNpilot_solid_2_scaffold_83_160
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170667..171425
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V326_9BRAD rbh
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:CEG07161.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch
hypothetical protein; K07090 rbh
SCNpilot_solid_2_scaffold_83_161
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171431..171832)
DNA (402bp) protein (134aa)
DoxX family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V325_9BRAD
DoxX {ECO:0000313|EMBL:CEG07162.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
DoxX protein; K15977 putative oxidoreductase
SCNpilot_solid_2_scaffold_83_162
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171953..172387)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V324_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52354.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_83_163
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172357..172638)
DNA (282bp) protein (94aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V323_9BRAD
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EFI52353.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia s
putative excinuclease ABC, C subunit
SCNpilot_solid_2_scaffold_83_164
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172891..173367)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Afipia sp. 1NLS2 RepID=D6V322_9BRAD
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=666684 species="Bacteria
greA1; transcription elongation factor GreA; K03624 transcription elongation factor GreA
SCNpilot_solid_2_scaffold_83_165
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173680..177009)
DNA (3330bp) protein (1110aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
carB; carbamoyl-phosphate synthase large chain CarB (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase large chain n=1 Tax=Afipia sp. 1NLS2 RepID=D6V321_9BRAD rbh
SCNpilot_solid_2_scaffold_83_166
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177284..177706
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJF5_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63642.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
SCNpilot_solid_2_scaffold_83_trna_3
unknown

Not on your lists

comp(177761..177834)
DNA (74bp)
transferRNA
SCNpilot_solid_2_scaffold_83_167
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177935..178624)
DNA (690bp) protein (230aa)
Methyltransferase type 12 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V317_9BRAD rbh
Methyltransferase domain protein {ECO:0000313|EMBL:CEG07170.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
putative methyltransferase rbh
SCNpilot_solid_2_scaffold_83_168
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178749..179273
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLG4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31167.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
DNA-binding ferritin-like protein; K04047 starvation-inducible DNA-binding protein rbh
SCNpilot_solid_2_scaffold_83_169
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179634..180824)
DNA (1191bp) protein (397aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl-phosphate synthase small chain CarA (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] rbh
Carbamoyl-phosphate synthase small chain n=1 Tax=Afipia sp. 1NLS2 RepID=D6V313_9BRAD rbh
SCNpilot_solid_2_scaffold_83_170
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

181032..181487
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V312_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07176.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
GatB/Yqey domain-containing protein; K09117 hypothetical protein
SCNpilot_solid_2_scaffold_83_171
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181593..182036)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NRU9_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31174.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_83_172
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182029..182343)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUQ7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31175.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
ArsR family transcriptional regulator
SCNpilot_solid_2_scaffold_83_173
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182551..183351)
DNA (801bp) protein (267aa)
N-formylglutamate amidohydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V309_9BRAD rbh
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EFI52339.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.
hypothetical protein rbh
SCNpilot_solid_2_scaffold_83_174
unknown

Not on your lists

comp(183669..184079)
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_solid_2_scaffold_83_175
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

184372..186369
DNA (1998bp) protein (666aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=666684 species="Bacteria; Proteobacter
dnaG; DNA primase DnaG (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] rbh
DNA primase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V307_9BRAD rbh
SCNpilot_solid_2_scaffold_83_176
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186657..188792
DNA (2136bp) protein (712aa)
RNA polymerase sigma factor RpoD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V306_9BRAD rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
rpoD2; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor rbh
Displaying items 151-180 of 206 in total

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