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SCNpilot_solid_2_scaffold_83_152

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 161157..161375

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Xanthobacteraceae RepID=UPI000367846D similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 76.0
  • Bit_score: 87
  • Evalue 5.80e-15
Prophage CP4-57 integrase {ECO:0000313|EMBL:CEG07150.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 64.0
  • Bit_score: 96
  • Evalue 1.30e-17
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 61.0
  • Bit_score: 87
  • Evalue 1.80e-15

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGCGCGGGCAGCCGACCACCGTAGCCGCATTGAAGCTCATGACCCTGTTGGCAGGCCGCCCGGGTGAGTTGTGGCGGGCGAAATGGATAGAGTTCGATCTCGACGGTGGTGTGTGGAATGTTCCGGCAAAGCGCATGAAGATGCGCAGGCCCCACCGCATCCCGTTGCCTGCGCAAGCTGTTGCCATGCGTGCGGCAGCTACTGGGATGAGCGCGTGA
PROTEIN sequence
Length: 73
MRGQPTTVAALKLMTLLAGRPGELWRAKWIEFDLDGGVWNVPAKRMKMRRPHRIPLPAQAVAMRAAATGMSA*