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SCNpilot_solid_2_scaffold_84_76

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(74421..76214)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V224_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 588.0
  • Bit_score: 1026
  • Evalue 0.0
  • rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CEG09863.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 589.0
  • Bit_score: 1037
  • Evalue 0.0
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 584.0
  • Bit_score: 927
  • Evalue 1.90e-267
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1794
ATGCCTCCGATCCCTCGAAAAATCACCGACGACCCCTATGGCGCGTTTCAGCTTGTCAAGCGGCTGGTTGCGGAACAGGGTGCGGTTTACTGGCGGCGTTATCTGCTCGTGCTCTTCCTGATGGCTATCGGAGCCGGCGCCAGCGCTGGATCTGCCTATCTGTTTGGCAAGGTCATCAATCAGGCTTACGTCTATCGCAACATCAACGGCATCATGATCTTGTCGGTGATAGTCATCGCGCTTTTTACTGCCAAGGGTATCGCCACCTATTTGCAAGCGGTGATGTTGTCGCGGATCAGCAACGCCATTCTCGCCAACAACCAGCGCAGAATGTTTGCGAAATTGATGCAGGAAAGCATCGGATTTTATTCGCAATCGCATTCATCTGACTATTTGAATCGCCTGTCCGCAGGCGCGGCCTCGATCACTCAGGTGCTCTCGCTGATTATTACGACCATCGGCAAGGATTTTCTGACCCTGATTGGCCTTGTTGTGGTGATGGTATCGCAGGACCCAGTTCTGTCGATGCTCAGCCTTGTCGTGGCGCCGCCGATGTTTGTGTTTGTTCGCAAGATTGTGCGCAGGGTGAAAAATCTCGCTGCGGGCCAGTTTCTCAGTATGTCCACCATCATGGAGGCGGTGCAAGAATCCATACAGGGCATACGCACGGTCAAGGCCTTTACGCTTGAAGCAACGATGGAAGCGAGAGTTAACAAAAGCGTTGCCCAGGTCGAAGCTCATGCCAACAAGATGGCGGTCGTTTCCAACCGCTCTGGCCCTTTGATGGAAATGCTGGGCGGTATCGCGATCGCCGGTGCTTTGATGTATGGCGGCTATCGCGTTATCGGGACCAATGCAGCCCCCGGGCAGTTCATATCGTTTATCACGGCGTTCCTGCTTGCCTATGAGCCAGCGAAGCGTCTGGCGCGTGTCAATATTGATCTGAACACCATGCTGATCGGAGCGCGGATGCTGCTTGAAATTGTCGATAGTCCGGCTTCCGAGCCGGATGACAGCGACAAGCCGGCATTGAAACTCACCCATGCAAAGGTCGAGTTCCGCGACGTGTCGTTTGCCTATCGCCCTGAGCAACTTGTGCTCAAATCGATGAATTTCGTTGCGCGTCCCGGTAAGGTGACGGCGCTGGTCGGTCCTTCCGGTGGTGGGAAGTCAACGATCCTGTCGTTGCTCCTGAGATTTTACGAGGTGGGCGATGGGGCAGTGGTAGTCGACGGTCAGCCGATCTCGGATTGTTCGCGTATCTCGTTACGTCAGCAGACAGCTTATGTCGGGCAGGATGTCTATCTTTTCCGAGGCTCCATTCGTGAGAATATAGCGTTTGGCAAACGTCACGCGACGGAGGAGGAGATCATTGCTGCGGCGCGCGCCGCATGCGCGCATGATTTCATCATGAGTTTTCCTCGGGGCTATGACACTCAGGTTGGGGAACATGGCACCCAATTGTCCGGAGGTCAGCGCCAGCGAGTTGCGATTGCCCGAGCCTTGATCAAGGATGCGCCGATCATTCTGCTCGATGAAGCAACGGCAGCACTCGACTCGGAATCGGAAAAGTTCGTGCAGGAGGCGATCGCGCATTTATGCAGGAACCGCACGACGATCGTCATCGCACATCGCCTTCATACGATTATGCATGCTGACCAGATTTTAGTGGTGGAAGATGGCACGATCGTCGAATCCGGCGTTCATGAAGATCTTCTCCGGAAGGACGGCCGCTACGCCGCTTTCTTTCGTCTCCAGCAACATCAGGCCGCGTTGCCATCCACGAGTATTTGA
PROTEIN sequence
Length: 598
MPPIPRKITDDPYGAFQLVKRLVAEQGAVYWRRYLLVLFLMAIGAGASAGSAYLFGKVINQAYVYRNINGIMILSVIVIALFTAKGIATYLQAVMLSRISNAILANNQRRMFAKLMQESIGFYSQSHSSDYLNRLSAGAASITQVLSLIITTIGKDFLTLIGLVVVMVSQDPVLSMLSLVVAPPMFVFVRKIVRRVKNLAAGQFLSMSTIMEAVQESIQGIRTVKAFTLEATMEARVNKSVAQVEAHANKMAVVSNRSGPLMEMLGGIAIAGALMYGGYRVIGTNAAPGQFISFITAFLLAYEPAKRLARVNIDLNTMLIGARMLLEIVDSPASEPDDSDKPALKLTHAKVEFRDVSFAYRPEQLVLKSMNFVARPGKVTALVGPSGGGKSTILSLLLRFYEVGDGAVVVDGQPISDCSRISLRQQTAYVGQDVYLFRGSIRENIAFGKRHATEEEIIAAARAACAHDFIMSFPRGYDTQVGEHGTQLSGGQRQRVAIARALIKDAPIILLDEATAALDSESEKFVQEAIAHLCRNRTTIVIAHRLHTIMHADQILVVEDGTIVESGVHEDLLRKDGRYAAFFRLQQHQAALPSTSI*