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SCNpilot_solid_2_scaffold_84

Search features with annotation key words

Displaying items 61-90 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_84_60
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58542..60443)
DNA (1902bp) protein (634aa)
cobT1; aerobic cobaltochelatase subunit CobT (EC:6.6.1.2); K09883 cobaltochelatase CobT [EC:6.6.1.2] rbh
Cobaltochelatase, CobT subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NWR0_AFIFE rbh
Cobaltochelatase, CobT subunit {ECO:0000313|EMBL:EKS30648.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 5
SCNpilot_solid_2_scaffold_84_61
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60454..61449)
DNA (996bp) protein (332aa)
cobS; aerobic cobaltochelatase subunit CobS (EC:6.6.1.2); K09882 cobaltochelatase CobS [EC:6.6.1.2] rbh
Cobalt chelatase, pCobS small subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D4_9BRAD rbh
Aerobic cobaltochelatase subunit CobS {ECO:0000313|EMBL:CEG10379.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (
SCNpilot_solid_2_scaffold_84_62
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61740..62384
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D5_9BRAD rbh
Inner membrane protein YabI {ECO:0000313|EMBL:CEG10378.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc
DedA family protein; K03975 membrane-associated protein
SCNpilot_solid_2_scaffold_84_63
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62438..63085)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NT60_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30645.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
heat shock protein DnaJ rbh
SCNpilot_solid_2_scaffold_84_64
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63236..63502
DNA (267bp) protein (89aa)
BolA family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D7_9BRAD
BolA family protein {ECO:0000313|EMBL:EFI53167.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
BolA family protein; K05527 BolA protein
SCNpilot_solid_2_scaffold_84_65
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63525..64835)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI53168.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
putative HlyC/CorC family of transporters with 2 CBS domains rbh
SCNpilot_solid_2_scaffold_84_66
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64845..66011)
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1035 species="Bacteria;
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] rbh
3-dehydroquinate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0D9_9BRAD rbh
SCNpilot_solid_2_scaffold_84_67
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66023..66637)
DNA (615bp) protein (205aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaprot
aroK; shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] rbh
Shikimate kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E0_9BRAD rbh
SCNpilot_solid_2_scaffold_84_68
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66814..66960
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG10372.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_84_69
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66975..67925
DNA (951bp) protein (317aa)
Tyrosine recombinase XerD n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E2_9BRAD rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scra
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD rbh
SCNpilot_solid_2_scaffold_84_70
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68041..69003
DNA (963bp) protein (321aa)
accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E3_9BRAD rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
SCNpilot_solid_2_scaffold_84_71
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69197..70648
DNA (1452bp) protein (484aa)
Pollen allergen Poa PIX/Phl PVI n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0E4_9BRAD rbh
Pollen allergen Poa PIX/Phl PVI {ECO:0000313|EMBL:EFI53174.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source=
hypothetical protein rbh
SCNpilot_solid_2_scaffold_84_72
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70718..71263)
DNA (546bp) protein (182aa)
Isochorismatase hydrolase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAP0_9BRAD rbh
Isochorismatase family protein {ECO:0000313|EMBL:CEG09849.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scr
isochorismatase hydrolase
SCNpilot_solid_2_scaffold_84_73
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71265..71885)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAN9_9BRAD rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFI49966.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
transcriptional regulator rbh
SCNpilot_solid_2_scaffold_84_74
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71979..73529
DNA (1551bp) protein (517aa)
hbaB; 4-hydroxyphenylacetate 3-hydroxylase; K14534 4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:4.2.1.120 5.3.3.3] rbh
Vinylacetyl-CoA Delta-isomerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAN8_9BRAD rbh
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase {ECO:0000313|EMBL:CEG09851.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
SCNpilot_solid_2_scaffold_84_75
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73574..74071)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAN7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI49964.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_84_76
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74421..76214)
DNA (1794bp) protein (598aa)
ABC transporter related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V224_9BRAD rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CEG09863.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
ABC transporter ATP-binding protein/permease; K06147 ATP-binding cassette, subfamily B, bacterial rbh
SCNpilot_solid_2_scaffold_84_77
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76378..77466
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V223_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG09864.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein rbh
SCNpilot_solid_2_scaffold_84_78
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77529..78647)
DNA (1119bp) protein (373aa)
Aminotransferase, DegT/DnrJ/EryC1/StrS family n=2 Tax=Oligotropha carboxidovorans RepID=F8BJB2_OLICM rbh
DegT/DnrJ/EryC1/StrS family aminotransferase rbh
Aminotransferase, DegT/DnrJ/EryC1/StrS family {ECO:0000313|EMBL:AEI08060.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source=
SCNpilot_solid_2_scaffold_84_79
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78727..79872)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUQ7_9BRAD rbh
putative carbamoyl-phosphate-synthetase protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_solid_2_scaffold_84_80
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79905..80942)
DNA (1038bp) protein (346aa)
Putative dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUQ6_9BRAD rbh
oxidoreductase domain-containing protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_solid_2_scaffold_84_81
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81126..81698
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QUQ4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63510.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
SCNpilot_solid_2_scaffold_84_82
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82091..83320)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HCJ7_RHIRD rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_solid_2_scaffold_84_83
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83606..84688
DNA (1083bp) protein (361aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
rfbB; dTDP-glucose 4,6-dehydratase RfbB (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] rbh
dTDP-glucose 4,6-dehydratase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V220_9BRAD rbh
SCNpilot_solid_2_scaffold_84_84
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84685..85596
DNA (912bp) protein (304aa)
rfbD; dTDP-4-dehydrorhamnose reductase RfbD (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] rbh
dTDP-4-dehydrorhamnose reductase n=2 Tax=Oligotropha carboxidovorans RepID=B6JCW7_OLICO rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CEG09873.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat s
SCNpilot_solid_2_scaffold_84_85
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85611..86507
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] rbh
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V217_9BRAD rbh
SCNpilot_solid_2_scaffold_84_86
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86504..87049
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFI53746.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EFI53746.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V216_9BRAD rbh
SCNpilot_solid_2_scaffold_84_87
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87086..88834)
DNA (1749bp) protein (583aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO
cysI; sulfite reductase (NADPH) hemoprotein subunit beta CysI (EC:1.8.1.2); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] rbh
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V215_9BRAD rbh
SCNpilot_solid_2_scaffold_84_88
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88846..90681)
DNA (1836bp) protein (612aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRN
cysJ; sulfite reductase (NADPH) flavoprotein subunit alpha CysJ (EC:1.8.1.2); K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] rbh
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Afipia sp. 1NLS2 RepID=D6V214_9BRAD rbh
SCNpilot_solid_2_scaffold_84_89
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91288..92892
DNA (1605bp) protein (535aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V212_9BRAD rbh
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EFI53742.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
putative histidine kinase/response regulator rbh
Displaying items 61-90 of 159 in total

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