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SCNpilot_solid_2_scaffold_84_86

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 86504..87049

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFI53746.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EFI53746.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyr similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 181.0
  • Bit_score: 304
  • Evalue 1.40e-79
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 282
  • Evalue 1.20e-73
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V216_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 181.0
  • Bit_score: 304
  • Evalue 9.80e-80
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACCGAAGCCGCGACCGGGATCGACGGAATCACCGTGATCGAACCGCAGGTTTTTCACGATGCGCGCGGCTATTTTTTCGAGAGTTTCAGTTCCCGACGCTTTGATGGCCTGGTCGGCAAGAACATCTCGTTCGTCCAGGACAATCAATCCCTTTCAAAGAAAGGTGTCGTGCGCGGCCTGCATTACCAGATCGCCCCGAAGGCTCAGGGCAAGTTGGTTCGGGTGCTCGCAGGGGAAATCTTCGATGTCGTCGTCGATATCCGGCGCGACTCGCCCCGGTTCGGACAATGGACCGGAATTATTCTCAGCGCGGACAACAAAAAACAGCTCTGGATTCCGGAAGGATTTGCCCACGGCTTCCAGGTTCTCTCGGACATCGCCGAAGTCTTTTACAAGACGACGGACTACTGGTCCGCCGAACATGAGCGCGCGATCCGCTGGAATGATCCAGCCATCGGCATCGACTGGCCGCTGAAAACAAATCCGGTCGTATCCGGCAAAGACAACGATGCGCCGCTCTTGAGCGCGGCAACCCTCGCCTAG
PROTEIN sequence
Length: 182
MTEAATGIDGITVIEPQVFHDARGYFFESFSSRRFDGLVGKNISFVQDNQSLSKKGVVRGLHYQIAPKAQGKLVRVLAGEIFDVVVDIRRDSPRFGQWTGIILSADNKKQLWIPEGFAHGFQVLSDIAEVFYKTTDYWSAEHERAIRWNDPAIGIDWPLKTNPVVSGKDNDAPLLSAATLA*