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SCNpilot_solid_2_scaffold_228_32

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(34027..35397)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6F0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 456.0
  • Bit_score: 871
  • Evalue 3.80e-250
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EFI51897.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 456.0
  • Bit_score: 871
  • Evalue 5.40e-250
ntrX; nitrogen assimilation regulatory protein NtrX; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 456.0
  • Bit_score: 852
  • Evalue 5.80e-245
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGCGAATGATATTCTAATCGTTGACGACGAATCCGACATCCGCGACCTCGTTGCCGGCATTCTCGACGATGAGGGATACAAGACGCGAACCGCGCGAGACAGCGACACGGCGCTGGCGGAAATATCGACCCGCCGGCCAAATCTGATCTTTCTCGATATCTGGATGCAGGGTAGCAAGCTCGACGGGTTGCAACTACTCGAACAAATCAAGAAAGATTATATCGATGTGCCGATCGTGATGATCTCCGGCCACGGCAACATCGAAACCGCTGTCGCTGCAATCAAGCGTGGCGCATATGACTTCATCGAGAAACCTTTCAAGGCCGATCGCCTGGTGCTGGTTGCGACGCGCGCGCTGGAAAATTCACGGCTAAAGCGCGAAGTCCGCGAACTCAAGCAACTCGCGCCGTCCTCCGGTTCACTGATCGGCAAGTCGCCCTGCATGAACCAGTTGCGCCAGACTATCGACCGGGCAGGCAAGGCCAACAGCCGTATCATGATCGTCGGACCGTCGGGAGCGGGCAAGGAACTGGTCGCACGCACGCTGCACAATCTATCGAGCCGCGCGTCGGGGCCATTTGTAGTTATCAACGCTGCCGCAATCACGCCAGAGCGCATGGAAGTCGAACTGTTCGGCGTGGAGTTAGCTGACAGCGAAACCGGCCGCAAGGCCGGCGCGCTGGAAGAGGCGCATGGCGGCACGCTCTTTATCGACGAGATCGCCGACATGCCGCGCGAGACGCAGAACAAAATTCTGCGCGTGCTGGTCGATCAGACCTTCCAGCGCGCCGGCGGCACGACCAAGGTGAATGTCGATGTCCGTATCATCTCGTCCACCTCGCGCAATCTGGAGGCGGAGATCGCAGAAGGACGTTTCCGCGAAGACCTTTATCACCGTCTTTCGGTGGTGCCGATCCGGGTGCCGCCGCTGGCCGAGCGCCGCGAGGACATCCCCGAACTCGTCGATTATTTCATGGACCAGATTTCAAGCACCACGGGCCTGCCGAAACGCAAGATCGGCGAGGATGCCATGGCAGTGCTACAATCCCACGTCTGGCCGGGCAACGTGCGCCAGTTACGTAACAACATCGAGCGTGTGATGATTTTGGCTGGCGGTGAACCGGATGCGGCGATCACCGCCGACATGCTGCCGCAGGACGTCGGGTCGATGATCCCGGCCATGCCGACCGGCGTGAACGGCGAACACATCATGGGGCTGCCGCTGCGCGAGGCTCGCGAAGTGTTCGAGCGCGACTACCTGATCGCTCAGATCAGCCGCTTCTCCGGCAACATCTCACGCACTGCGGAATTCGTCGGCATGGAGCGGTCTGCGCTTCATCGCAAGCTCAAGGCGCTGGGAGTCGGCTGA
PROTEIN sequence
Length: 457
MANDILIVDDESDIRDLVAGILDDEGYKTRTARDSDTALAEISTRRPNLIFLDIWMQGSKLDGLQLLEQIKKDYIDVPIVMISGHGNIETAVAAIKRGAYDFIEKPFKADRLVLVATRALENSRLKREVRELKQLAPSSGSLIGKSPCMNQLRQTIDRAGKANSRIMIVGPSGAGKELVARTLHNLSSRASGPFVVINAAAITPERMEVELFGVELADSETGRKAGALEEAHGGTLFIDEIADMPRETQNKILRVLVDQTFQRAGGTTKVNVDVRIISSTSRNLEAEIAEGRFREDLYHRLSVVPIRVPPLAERREDIPELVDYFMDQISSTTGLPKRKIGEDAMAVLQSHVWPGNVRQLRNNIERVMILAGGEPDAAITADMLPQDVGSMIPAMPTGVNGEHIMGLPLREAREVFERDYLIAQISRFSGNISRTAEFVGMERSALHRKLKALGVG*